Basic Information

Symbol
circAFF1
RNA Class
circRNA
Alias
ALF Transcription Elongation Factor 1 AF4 FEL AF4/FMR2 Family Member 1 MLLT2 PBM1 ALL1-Fused Gene From Chromosome 4 Protein Pre-B-Cell Monocytic Leukemia Partner 1 Proto-Oncogene AF4 AF-4 Myeloid/Lymphoid Or Mixed-Lineage Leukemia (Trithorax (Drosophila) Homolog); Translocated To, 2 Myeloid/Lymphoid Or Mixed-Lineage Leukemia (Trithorax Homolog, Drosophila); Translocated To, 2 ALL1-Fused Gene From Chromosome 4 AF4/FMR2 Family, Member 1 KMT2A/AFF1 Fusion Protein Protein AF-4 Protein FEL
Location (GRCh37)
4:87869650-88061059 UCSC Genome Browser
Location (GRCh38)
4:86948498-87139907
UCSC Genome Browser Search in Marker Scope
Host gene
AFF1
Host category
mRNA
Forensic tag(s)
Postmortem interval inference
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_AFF1_0006000 Intron-Exon-Intron chr4:87982927-88012981 chr4:87061775-87091829 87 nt 0.4138
hsa_chr4_0621800 Intergenic-Intergenic chr4:87985649-87991386 chr4:87064497-87070234 250 nt 0.3840
hsa_AFF1_0006100 Intron-Exon-Intron chr4:87988236-88005316 chr4:87067084-87084164 218 nt 0.3899
hsa_AFF1_0006200 Intron-Intron chr4:87988408-87988605 chr4:87067256-87067453 198 nt 0.4040
hsa_AFF1_0006300 Intron-Intron chr4:87988408-87990321 chr4:87067256-87069169 1914 nt 0.4039
hsa_AFF1_0006400 Intron-Exon-Intron chr4:87988408-88016121 chr4:87067256-87094969 253 nt 0.3913
hsa_chr4_0621900 Intergenic-Intergenic chr4:87996726-87997289 chr4:87075574-87076137 564 nt 0.3723
hsa_AFF1_0006500 Intron-Intron chr4:87996829-87997306 chr4:87075677-87076154 478 nt 0.3724
hsa_AFF1_0007100 Exon-Exon chr4:88005272-88016121 chr4:87084120-87094969 378 nt 0.4392
hsa_AFF1_0006900 Exon-Exon chr4:88005272-88026997 chr4:87084120-87105845 317 nt 0.4637
Showing 101 to 110 of 380 entries
Forensic Context

A study in mice demonstrated that the circAFF1 serves as a stable reference gene for postmortem interval estimation in muscle tissue [Fanzhang Lei et al. DOI:10.1093/gpbjnl/qzag007].