Basic Information

Symbol
circAFF1
RNA Class
circRNA
Alias
ALF Transcription Elongation Factor 1 AF4 FEL AF4/FMR2 Family Member 1 MLLT2 PBM1 ALL1-Fused Gene From Chromosome 4 Protein Pre-B-Cell Monocytic Leukemia Partner 1 Proto-Oncogene AF4 AF-4 Myeloid/Lymphoid Or Mixed-Lineage Leukemia (Trithorax (Drosophila) Homolog); Translocated To, 2 Myeloid/Lymphoid Or Mixed-Lineage Leukemia (Trithorax Homolog, Drosophila); Translocated To, 2 ALL1-Fused Gene From Chromosome 4 AF4/FMR2 Family, Member 1 KMT2A/AFF1 Fusion Protein Protein AF-4 Protein FEL
Location (GRCh37)
4:87869650-88061059 UCSC Genome Browser
Location (GRCh38)
4:86948498-87139907
UCSC Genome Browser Search in Marker Scope
Host gene
AFF1
Host category
mRNA
Forensic tag(s)
Postmortem interval inference
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_AFF1_0010100 Exon-Exon chr4:88012945-88053560 chr4:87091793-87132408 92 nt 0.3804
hsa_chr4_0622200 Intergenic-Intergenic chr4:88013191-88044294 chr4:87092039-87123142 250 nt 0.3600
hsa_AFF1_0010200 Exon-Exon chr4:88016067-88026834 chr4:87094915-87105682 110 nt 0.4273
hsa_AFF1_0010300 Exon-Exon chr4:88016067-88029467 chr4:87094915-87108315 305 nt 0.5082
hsa_AFF1_0010400 Exon-Exon chr4:88016067-88036451 chr4:87094915-87115299 61 nt 0.3443
hsa_chr4_0622300 Intergenic-Intergenic chr4:88023624-88023809 chr4:87102472-87102657 186 nt 0.4462
hsa_AFF1_0010600 Exon-Exon chr4:88026780-88026997 chr4:87105628-87105845 38 nt 0.6053
hsa_AFF1_0010500 Exon-Exon chr4:88026780-88029467 chr4:87105628-87108315 250 nt 0.5440
hsa_AFF1_0010700 Exon-Exon chr4:88026780-88036451 chr4:87105628-87115299 99 nt 0.5354
hsa_AFF1_0010800 Exon-Exon chr4:88026780-88046295 chr4:87105628-87125143 368 nt 0.5734
Showing 141 to 150 of 380 entries
Forensic Context

A study in mice demonstrated that the circAFF1 serves as a stable reference gene for postmortem interval estimation in muscle tissue [Fanzhang Lei et al. DOI:10.1093/gpbjnl/qzag007].