Basic Information

Symbol
circAFF1
RNA Class
circRNA
Alias
ALF Transcription Elongation Factor 1 AF4 FEL AF4/FMR2 Family Member 1 MLLT2 PBM1 ALL1-Fused Gene From Chromosome 4 Protein Pre-B-Cell Monocytic Leukemia Partner 1 Proto-Oncogene AF4 AF-4 Myeloid/Lymphoid Or Mixed-Lineage Leukemia (Trithorax (Drosophila) Homolog); Translocated To, 2 Myeloid/Lymphoid Or Mixed-Lineage Leukemia (Trithorax Homolog, Drosophila); Translocated To, 2 ALL1-Fused Gene From Chromosome 4 AF4/FMR2 Family, Member 1 KMT2A/AFF1 Fusion Protein Protein AF-4 Protein FEL
Location (GRCh37)
4:87869650-88061059 UCSC Genome Browser
Location (GRCh38)
4:86948498-87139907
UCSC Genome Browser Search in Marker Scope
Host gene
AFF1
Host category
mRNA
Forensic tag(s)
Postmortem interval inference
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_AFF1_0010900 Exon-Exon chr4:88026780-88048855 chr4:87105628-87127703 246 nt 0.4797
hsa_AFF1_0011000 Exon-Exon chr4:88026780-88053016 chr4:87105628-87131864 1887 nt 0.5506
hsa_AFF1_0011100 Exon-Exon chr4:88026780-88053560 chr4:87105628-87132408 55 nt 0.5091
hsa_AFF1_0011200 Exon-Exon chr4:88026780-88061059 chr4:87105628-87139907 55 nt 0.5091
hsa_AFF1_0011300 Intron-Intron chr4:88026998-88028040 chr4:87105846-87106888 1043 nt 0.4056
hsa_AFF1_0011400 Intron-Exon-Intron chr4:88027882-88053560 chr4:87106730-87132408 210 nt 0.3952
hsa_AFF1_0011500 Intron-Exon-Intron chr4:88027978-88029467 chr4:87106826-87108315 220 nt 0.5045
hsa_AFF1_0011600 Intron-Exon-Intron chr4:88027978-88053560 chr4:87106826-87132408 63 nt 0.4127
hsa_AFF1_0011700 Exon-Exon chr4:88029311-88036451 chr4:87108159-87115299 1090 nt 0.5991
hsa_AFF1_0011800 Exon-Exon chr4:88029311-88047488 chr4:87108159-87126336 1432 nt 0.5817
Showing 151 to 160 of 380 entries
Forensic Context

A study in mice demonstrated that the circAFF1 serves as a stable reference gene for postmortem interval estimation in muscle tissue [Fanzhang Lei et al. DOI:10.1093/gpbjnl/qzag007].