Basic Information

Symbol
circAFF1
RNA Class
circRNA
Alias
ALF Transcription Elongation Factor 1 AF4 FEL AF4/FMR2 Family Member 1 MLLT2 PBM1 ALL1-Fused Gene From Chromosome 4 Protein Pre-B-Cell Monocytic Leukemia Partner 1 Proto-Oncogene AF4 AF-4 Myeloid/Lymphoid Or Mixed-Lineage Leukemia (Trithorax (Drosophila) Homolog); Translocated To, 2 Myeloid/Lymphoid Or Mixed-Lineage Leukemia (Trithorax Homolog, Drosophila); Translocated To, 2 ALL1-Fused Gene From Chromosome 4 AF4/FMR2 Family, Member 1 KMT2A/AFF1 Fusion Protein Protein AF-4 Protein FEL
Location (GRCh37)
4:87869650-88061059 UCSC Genome Browser
Location (GRCh38)
4:86948498-87139907
UCSC Genome Browser Search in Marker Scope
Host gene
AFF1
Host category
mRNA
Forensic tag(s)
Postmortem interval inference
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_AFF1_0011900 Exon-Exon chr4:88029311-88048269 chr4:87108159-87127117 275 nt 0.5818
hsa_AFF1_0012000 Exon-Exon chr4:88029311-88048855 chr4:87108159-87127703 61 nt 0.4262
hsa_AFF1_0012100 Exon-Exon chr4:88029311-88052371 chr4:87108159-87131219 157 nt 0.5414
hsa_AFF1_0012200 Exon-Exon chr4:88029311-88053016 chr4:87108159-87131864 270 nt 0.4222
hsa_AFF1_0012300 Exon-Exon chr4:88029311-88053560 chr4:87108159-87132408 163 nt 0.5399
hsa_AFF1_0012400 Intron-Intron chr4:88029677-88030021 chr4:87108525-87108869 345 nt 0.3623
hsa_AFF1_0012500 Intron-Exon-Intron chr4:88033504-88053016 chr4:87112352-87131864 78 nt 0.4103
hsa_AFF1_0012800 Intron-Exon-Intron chr4:88035519-88039487 chr4:87114367-87118335 145 nt 0.3655
hsa_AFF1_0012900 Exon-Exon chr4:88035519-88048269 chr4:87114367-87127117 92 nt 0.4457
hsa_AFF1_0013000 Exon-Exon chr4:88035519-88048855 chr4:87114367-87127703 153 nt 0.4379
Showing 161 to 170 of 380 entries
Forensic Context

A study in mice demonstrated that the circAFF1 serves as a stable reference gene for postmortem interval estimation in muscle tissue [Fanzhang Lei et al. DOI:10.1093/gpbjnl/qzag007].