Basic Information

Symbol
circAFF1
RNA Class
circRNA
Alias
ALF Transcription Elongation Factor 1 AF4 FEL AF4/FMR2 Family Member 1 MLLT2 PBM1 ALL1-Fused Gene From Chromosome 4 Protein Pre-B-Cell Monocytic Leukemia Partner 1 Proto-Oncogene AF4 AF-4 Myeloid/Lymphoid Or Mixed-Lineage Leukemia (Trithorax (Drosophila) Homolog); Translocated To, 2 Myeloid/Lymphoid Or Mixed-Lineage Leukemia (Trithorax Homolog, Drosophila); Translocated To, 2 ALL1-Fused Gene From Chromosome 4 AF4/FMR2 Family, Member 1 KMT2A/AFF1 Fusion Protein Protein AF-4 Protein FEL
Location (GRCh37)
4:87869650-88061059 UCSC Genome Browser
Location (GRCh38)
4:86948498-87139907
UCSC Genome Browser Search in Marker Scope
Host gene
AFF1
Host category
mRNA
Forensic tag(s)
Postmortem interval inference
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_AFF1_0006700 Exon-Exon chr4:88005272-88012981 chr4:87084120-87091829 169 nt 0.4556
hsa_AFF1_0006800 Exon-Exon chr4:88005272-88046295 chr4:87084120-87125143 1514 nt 0.5548
hsa_AFF1_0008900 Exon-Exon chr4:88011136-88055846 chr4:87089984-87134694 2431 nt 0.5348
hsa_AFF1_0009800 Exon-Exon chr4:88012945-88016121 chr4:87091793-87094969 92 nt 0.3804
hsa_AFF1_0012600 Exon-Exon chr4:88035519-88036451 chr4:87114367-87115299 933 nt 0.6088
hsa_AFF1_0014800 Exon-Exon chr4:88053423-88053560 chr4:87132271-87132408 138 nt 0.4203
hsa_AFF1_0000100 Exon-Exon chr4:87869650-87968746 chr4:86948498-87047594 1095 nt 0.5041
hsa_AFF1_0002400 Exon-Exon chr4:87928153-87968746 chr4:87007001-87047594 1445 nt 0.5647
hsa_AFF1_0002500 Exon-Exon chr4:87928153-88012981 chr4:87007001-87091829 1614 nt 0.5533
hsa_AFF1_0002600 Exon-Exon chr4:87928153-88026997 chr4:87007001-87105845 1762 nt 0.5465
Showing 11 to 20 of 380 entries
Forensic Context

A study in mice demonstrated that the circAFF1 serves as a stable reference gene for postmortem interval estimation in muscle tissue [Fanzhang Lei et al. DOI:10.1093/gpbjnl/qzag007].