Basic Information

Symbol
circAFF1
RNA Class
circRNA
Alias
ALF Transcription Elongation Factor 1 AF4 FEL AF4/FMR2 Family Member 1 MLLT2 PBM1 ALL1-Fused Gene From Chromosome 4 Protein Pre-B-Cell Monocytic Leukemia Partner 1 Proto-Oncogene AF4 AF-4 Myeloid/Lymphoid Or Mixed-Lineage Leukemia (Trithorax (Drosophila) Homolog); Translocated To, 2 Myeloid/Lymphoid Or Mixed-Lineage Leukemia (Trithorax Homolog, Drosophila); Translocated To, 2 ALL1-Fused Gene From Chromosome 4 AF4/FMR2 Family, Member 1 KMT2A/AFF1 Fusion Protein Protein AF-4 Protein FEL
Location (GRCh37)
4:87869650-88061059 UCSC Genome Browser
Location (GRCh38)
4:86948498-87139907
UCSC Genome Browser Search in Marker Scope
Host gene
AFF1
Host category
mRNA
Forensic tag(s)
Postmortem interval inference
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_chr4_0620500 Intergenic-Intergenic chr4:87923537-87931954 chr4:87002385-87010802 250 nt 0.3000
hsa_AFF1_0002100 Intron-Intron chr4:87923839-87924622 chr4:87002687-87003470 784 nt 0.4031
hsa_AFF1_0002200 Intron-Intron chr4:87925012-87925923 chr4:87003860-87004771 912 nt 0.3202
hsa_AFF1_0002300 Intron-Intron chr4:87926409-87931963 chr4:87005257-87010811 250 nt 0.3320
hsa_AFF1_0002700 Intron-Intron chr4:87928577-87967249 chr4:87007425-87046097 250 nt 0.4440
hsa_AFF1_0002800 Intron-Exon-Intron chr4:87932855-88016121 chr4:87011703-87094969 127 nt 0.4488
hsa_AFF1_0002900 Intron-Intron chr4:87935748-87949778 chr4:87014596-87028626 250 nt 0.2600
hsa_chr4_0620600 Intergenic-Intergenic chr4:87937626-87937838 chr4:87016474-87016686 213 nt 0.3991
hsa_chr4_0620700 Intergenic-Intergenic chr4:87937900-87940173 chr4:87016748-87019021 2274 nt 0.3584
hsa_AFF1_0003000 Intron-Exon chr4:87941658-87968746 chr4:87020506-87047594 237 nt 0.4008
Showing 231 to 240 of 380 entries
Forensic Context

A study in mice demonstrated that the circAFF1 serves as a stable reference gene for postmortem interval estimation in muscle tissue [Fanzhang Lei et al. DOI:10.1093/gpbjnl/qzag007].