Basic Information

Symbol
circAFF1
RNA Class
circRNA
Alias
ALF Transcription Elongation Factor 1 AF4 FEL AF4/FMR2 Family Member 1 MLLT2 PBM1 ALL1-Fused Gene From Chromosome 4 Protein Pre-B-Cell Monocytic Leukemia Partner 1 Proto-Oncogene AF4 AF-4 Myeloid/Lymphoid Or Mixed-Lineage Leukemia (Trithorax (Drosophila) Homolog); Translocated To, 2 Myeloid/Lymphoid Or Mixed-Lineage Leukemia (Trithorax Homolog, Drosophila); Translocated To, 2 ALL1-Fused Gene From Chromosome 4 AF4/FMR2 Family, Member 1 KMT2A/AFF1 Fusion Protein Protein AF-4 Protein FEL
Location (GRCh37)
4:87869650-88061059 UCSC Genome Browser
Location (GRCh38)
4:86948498-87139907
UCSC Genome Browser Search in Marker Scope
Host gene
AFF1
Host category
mRNA
Forensic tag(s)
Postmortem interval inference
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_AFF1_0003100 Intron-Intron chr4:87943216-87945883 chr4:87022064-87024731 2668 nt 0.3786
hsa_chr4_0620800 Intergenic-Intergenic chr4:87947567-87947922 chr4:87026415-87026770 356 nt 0.4831
hsa_AFF1_0003200 Intron-Intron chr4:87948386-87949778 chr4:87027234-87028626 178 nt 0.3652
hsa_AFF1_0003400 Intron-Exon chr4:87949663-87968746 chr4:87028511-87047594 546 nt 0.4469
hsa_AFF1_0003300 Intron-Exon chr4:87949663-87968834 chr4:87028511-87047682 250 nt 0.3280
hsa_chr4_0620900 Intergenic-Intergenic chr4:87950663-87950890 chr4:87029511-87029738 228 nt 0.4167
hsa_chr4_0621000 Intergenic-Intergenic chr4:87954041-87954433 chr4:87032889-87033281 393 nt 0.4478
hsa_AFF1_0003500 Intron-Intron chr4:87954206-87954890 chr4:87033054-87033738 685 nt 0.3971
hsa_AFF1_0003600 Intron-Intron chr4:87954801-87955229 chr4:87033649-87034077 429 nt 0.3776
hsa_AFF1_0003700 Intron-Intron chr4:87956621-87961816 chr4:87035469-87040664 250 nt 0.4240
Showing 241 to 250 of 380 entries
Forensic Context

A study in mice demonstrated that the circAFF1 serves as a stable reference gene for postmortem interval estimation in muscle tissue [Fanzhang Lei et al. DOI:10.1093/gpbjnl/qzag007].