Basic Information
Symbol
circAFF1
RNA Class
circRNA
Alias
ALF Transcription Elongation Factor 1
AF4
FEL
AF4/FMR2 Family Member 1
MLLT2
PBM1
ALL1-Fused Gene From Chromosome 4 Protein
Pre-B-Cell Monocytic Leukemia Partner 1
Proto-Oncogene AF4
AF-4
Myeloid/Lymphoid Or Mixed-Lineage Leukemia (Trithorax (Drosophila) Homolog); Translocated To, 2
Myeloid/Lymphoid Or Mixed-Lineage Leukemia (Trithorax Homolog, Drosophila); Translocated To, 2
ALL1-Fused Gene From Chromosome 4
AF4/FMR2 Family, Member 1
KMT2A/AFF1 Fusion Protein
Protein AF-4
Protein FEL
Location (GRCh37)
4:87869650-88061059
UCSC Genome Browser
Location (GRCh38)
4:86948498-87139907
Host gene
AFF1
Host category
mRNA
Forensic tag(s)
Postmortem interval inference
External database
Transcripts
| ID | Type | Location (GRCh37) | Location (GRCh38) | Length | GC content |
|---|---|---|---|---|---|
| hsa_chr4_0621600 | Intergenic-Intergenic | chr4:87972869-87973297 | chr4:87051717-87052145 | 429 nt | 0.4662 |
| hsa_AFF1_0005800 | Intron-Intron | chr4:87973871-87974181 | chr4:87052719-87053029 | 311 nt | 0.4598 |
| hsa_chr4_0621700 | Intergenic-Intergenic | chr4:87975876-87976893 | chr4:87054724-87055741 | 1018 nt | 0.4106 |
| hsa_AFF1_0005900 | Intron-Intron | chr4:87978287-87978534 | chr4:87057135-87057382 | 248 nt | 0.4597 |
| hsa_AFF1_0006000 | Intron-Exon-Intron | chr4:87982927-88012981 | chr4:87061775-87091829 | 87 nt | 0.4138 |
| hsa_chr4_0621800 | Intergenic-Intergenic | chr4:87985649-87991386 | chr4:87064497-87070234 | 250 nt | 0.3840 |
| hsa_AFF1_0006100 | Intron-Exon-Intron | chr4:87988236-88005316 | chr4:87067084-87084164 | 218 nt | 0.3899 |
| hsa_AFF1_0006200 | Intron-Intron | chr4:87988408-87988605 | chr4:87067256-87067453 | 198 nt | 0.4040 |
| hsa_AFF1_0006300 | Intron-Intron | chr4:87988408-87990321 | chr4:87067256-87069169 | 1914 nt | 0.4039 |
| hsa_AFF1_0006400 | Intron-Exon-Intron | chr4:87988408-88016121 | chr4:87067256-87094969 | 253 nt | 0.3913 |
Showing 271 to 280 of 380 entries
Forensic Context
A study in mice demonstrated that the circAFF1 serves as a stable reference gene for postmortem interval estimation in muscle tissue [Fanzhang Lei et al. DOI:10.1093/gpbjnl/qzag007].