Basic Information

Symbol
circAFF1
RNA Class
circRNA
Alias
ALF Transcription Elongation Factor 1 AF4 FEL AF4/FMR2 Family Member 1 MLLT2 PBM1 ALL1-Fused Gene From Chromosome 4 Protein Pre-B-Cell Monocytic Leukemia Partner 1 Proto-Oncogene AF4 AF-4 Myeloid/Lymphoid Or Mixed-Lineage Leukemia (Trithorax (Drosophila) Homolog); Translocated To, 2 Myeloid/Lymphoid Or Mixed-Lineage Leukemia (Trithorax Homolog, Drosophila); Translocated To, 2 ALL1-Fused Gene From Chromosome 4 AF4/FMR2 Family, Member 1 KMT2A/AFF1 Fusion Protein Protein AF-4 Protein FEL
Location (GRCh37)
4:87869650-88061059 UCSC Genome Browser
Location (GRCh38)
4:86948498-87139907
UCSC Genome Browser Search in Marker Scope
Host gene
AFF1
Host category
mRNA
Forensic tag(s)
Postmortem interval inference
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_chr4_0621900 Intergenic-Intergenic chr4:87996726-87997289 chr4:87075574-87076137 564 nt 0.3723
hsa_AFF1_0006500 Intron-Intron chr4:87996829-87997306 chr4:87075677-87076154 478 nt 0.3724
hsa_AFF1_0007100 Exon-Exon chr4:88005272-88016121 chr4:87084120-87094969 378 nt 0.4392
hsa_AFF1_0006900 Exon-Exon chr4:88005272-88026997 chr4:87084120-87105845 317 nt 0.4637
hsa_AFF1_0007000 Exon-Exon chr4:88005272-88029467 chr4:87084120-87108315 474 nt 0.4895
hsa_AFF1_0007200 Exon-Exon chr4:88005272-88036451 chr4:87084120-87115299 202 nt 0.5149
hsa_AFF1_0007300 Exon-Exon chr4:88005272-88048855 chr4:87084120-87127703 198 nt 0.4343
hsa_AFF1_0007400 Exon-Exon chr4:88005272-88061059 chr4:87084120-87139907 132 nt 0.4621
hsa_AFF1_0007700 Exon-Exon chr4:88005275-88011222 chr4:87084123-87090070 283 nt 0.4558
hsa_AFF1_0007800 Exon-Exon chr4:88005275-88012981 chr4:87084123-87091829 320 nt 0.4531
Showing 281 to 290 of 380 entries
Forensic Context

A study in mice demonstrated that the circAFF1 serves as a stable reference gene for postmortem interval estimation in muscle tissue [Fanzhang Lei et al. DOI:10.1093/gpbjnl/qzag007].