Basic Information

Symbol
circAFF1
RNA Class
circRNA
Alias
ALF Transcription Elongation Factor 1 AF4 FEL AF4/FMR2 Family Member 1 MLLT2 PBM1 ALL1-Fused Gene From Chromosome 4 Protein Pre-B-Cell Monocytic Leukemia Partner 1 Proto-Oncogene AF4 AF-4 Myeloid/Lymphoid Or Mixed-Lineage Leukemia (Trithorax (Drosophila) Homolog); Translocated To, 2 Myeloid/Lymphoid Or Mixed-Lineage Leukemia (Trithorax Homolog, Drosophila); Translocated To, 2 ALL1-Fused Gene From Chromosome 4 AF4/FMR2 Family, Member 1 KMT2A/AFF1 Fusion Protein Protein AF-4 Protein FEL
Location (GRCh37)
4:87869650-88061059 UCSC Genome Browser
Location (GRCh38)
4:86948498-87139907
UCSC Genome Browser Search in Marker Scope
Host gene
AFF1
Host category
mRNA
Forensic tag(s)
Postmortem interval inference
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_chr4_0622500 Intergenic-Intergenic chr4:88044972-88045142 chr4:87123820-87123990 171 nt 0.3743
hsa_AFF1_0013500 Exon-Exon chr4:88046189-88048855 chr4:87125037-87127703 168 nt 0.3929
hsa_AFF1_0013600 Exon-Exon chr4:88046189-88053016 chr4:87125037-87131864 107 nt 0.3738
hsa_AFF1_0013700 Exon-Exon chr4:88046189-88053560 chr4:87125037-87132408 107 nt 0.3738
hsa_AFF1_0013800 Exon-Exon chr4:88046189-88061059 chr4:87125037-87139907 107 nt 0.3738
hsa_AFF1_0013900 Exon-Exon chr4:88047251-88052371 chr4:87126099-87131219 296 nt 0.4561
hsa_AFF1_0014000 Exon-Exon chr4:88047251-88053016 chr4:87126099-87131864 209 nt 0.4211
hsa_AFF1_0014100 Exon-Exon chr4:88047251-88053560 chr4:87126099-87132408 735 nt 0.4803
hsa_AFF1_0014200 Exon-Exon chr4:88047285-88048855 chr4:87126133-87127703 153 nt 0.4379
hsa_AFF1_0014300 Intron-Intron chr4:88047489-88048147 chr4:87126337-87126995 659 nt 0.3854
Showing 351 to 360 of 380 entries
Forensic Context

A study in mice demonstrated that the circAFF1 serves as a stable reference gene for postmortem interval estimation in muscle tissue [Fanzhang Lei et al. DOI:10.1093/gpbjnl/qzag007].