Basic Information

Symbol
circAFF1
RNA Class
circRNA
Alias
ALF Transcription Elongation Factor 1 AF4 FEL AF4/FMR2 Family Member 1 MLLT2 PBM1 ALL1-Fused Gene From Chromosome 4 Protein Pre-B-Cell Monocytic Leukemia Partner 1 Proto-Oncogene AF4 AF-4 Myeloid/Lymphoid Or Mixed-Lineage Leukemia (Trithorax (Drosophila) Homolog); Translocated To, 2 Myeloid/Lymphoid Or Mixed-Lineage Leukemia (Trithorax Homolog, Drosophila); Translocated To, 2 ALL1-Fused Gene From Chromosome 4 AF4/FMR2 Family, Member 1 KMT2A/AFF1 Fusion Protein Protein AF-4 Protein FEL
Location (GRCh37)
4:87869650-88061059 UCSC Genome Browser
Location (GRCh38)
4:86948498-87139907
UCSC Genome Browser Search in Marker Scope
Host gene
AFF1
Host category
mRNA
Forensic tag(s)
Postmortem interval inference
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_chr4_0622900 Intergenic-Intergenic chr4:88055776-88056826 chr4:87134624-87135674 166 nt 0.5181
hsa_chr4_0623000 Intergenic-Intergenic chr4:88056638-88056848 chr4:87135486-87135696 211 nt 0.3934
hsa_chr4_0623100 Intergenic-Intergenic chr4:88057767-88057937 chr4:87136615-87136785 171 nt 0.3977
hsa_AFF1_0015200 Exon-Exon chr4:88058963-88061059 chr4:87137811-87139907 177 nt 0.4294
hsa_AFF1_0015300 Exon-Exon chr4:88059042-88061059 chr4:87137890-87139907 2018 nt 0.3642
hsa_AFF1_0015400 Exon-Exon chr4:88059492-88059846 chr4:87138340-87138694 355 nt 0.3324
hsa_AFF1_0015500 Exon-Exon chr4:88059492-88060841 chr4:87138340-87139689 1350 nt 0.3541
hsa_AFF1_0015600 Exon-Exon chr4:88059864-88060814 chr4:87138712-87139662 951 nt 0.3554
hsa_AFF1_0015700 Exon-Exon chr4:88059864-88060885 chr4:87138712-87139733 1022 nt 0.3571
hsa_AFF1_0015800 Exon-Exon chr4:88060473-88060908 chr4:87139321-87139756 436 nt 0.3647
Showing 371 to 380 of 380 entries
Forensic Context

A study in mice demonstrated that the circAFF1 serves as a stable reference gene for postmortem interval estimation in muscle tissue [Fanzhang Lei et al. DOI:10.1093/gpbjnl/qzag007].