Basic Information

Symbol
circAFF1
RNA Class
circRNA
Alias
ALF Transcription Elongation Factor 1 AF4 FEL AF4/FMR2 Family Member 1 MLLT2 PBM1 ALL1-Fused Gene From Chromosome 4 Protein Pre-B-Cell Monocytic Leukemia Partner 1 Proto-Oncogene AF4 AF-4 Myeloid/Lymphoid Or Mixed-Lineage Leukemia (Trithorax (Drosophila) Homolog); Translocated To, 2 Myeloid/Lymphoid Or Mixed-Lineage Leukemia (Trithorax Homolog, Drosophila); Translocated To, 2 ALL1-Fused Gene From Chromosome 4 AF4/FMR2 Family, Member 1 KMT2A/AFF1 Fusion Protein Protein AF-4 Protein FEL
Location (GRCh37)
4:87869650-88061059 UCSC Genome Browser
Location (GRCh38)
4:86948498-87139907
UCSC Genome Browser Search in Marker Scope
Host gene
AFF1
Host category
mRNA
Forensic tag(s)
Postmortem interval inference
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_AFF1_0012600 Exon-Exon chr4:88035519-88036451 chr4:87114367-87115299 933 nt 0.6088
hsa_AFF1_0014800 Exon-Exon chr4:88053423-88053560 chr4:87132271-87132408 138 nt 0.4203
hsa_AFF1_0000400 Intron-Exon-Intron chr4:87869650-87895223 chr4:86948498-86974071 316 nt 0.3956
hsa_AFF1_0000200 Intron-Exon-Intron chr4:87869650-87928576 chr4:86948498-87007424 250 nt 0.4120
hsa_AFF1_0000500 Exon-Exon chr4:87869650-87968826 chr4:86948498-87047674 74 nt 0.4324
hsa_AFF1_0000600 Exon-Exon chr4:87869650-87968834 chr4:86948498-87047682 80 nt 0.4625
hsa_AFF1_0000700 Exon-Exon chr4:87869650-88005316 chr4:86948498-87084164 45 nt 0.4222
hsa_AFF1_0000800 Exon-Exon chr4:87869650-88012981 chr4:86948498-87091829 111 nt 0.4324
hsa_AFF1_0000900 Exon-Exon chr4:87869650-88016121 chr4:86948498-87094969 98 nt 0.3776
hsa_AFF1_0001000 Exon-Exon chr4:87869650-88036451 chr4:86948498-87115299 80 nt 0.4250
Showing 31 to 40 of 380 entries
Forensic Context

A study in mice demonstrated that the circAFF1 serves as a stable reference gene for postmortem interval estimation in muscle tissue [Fanzhang Lei et al. DOI:10.1093/gpbjnl/qzag007].