Basic Information
Symbol
circLIN54
RNA Class
circRNA
Alias
Lin-54 DREAM MuvB Core Complex Component
CXCDC1
MIP120
JC8.6
TCX1
CXC Domain-Containing Protein 1
Protein Lin-54 Homolog
DKFZp686L1814
Lin-54 Homolog (C. Elegans)
CXC Domain Containing 1
Lin-54 Homolog
KIAA2037
Location (GRCh37)
4:83838097-83928847
UCSC Genome Browser
Location (GRCh38)
4:82916944-83007694
Host gene
LIN54
Host category
mRNA
Forensic tag(s)
Drug abuse diagnoses
External database
Transcripts
| ID | Type | Location (GRCh37) | Location (GRCh38) | Length | GC content |
|---|---|---|---|---|---|
| hsa_LIN54_0000200 | Exon-Exon | chr4:83852096-83867627 | chr4:82930943-82946474 | 1097 nt | 0.4476 |
| hsa_LIN54_0000300 | Exon-Exon | chr4:83852096-83900159 | chr4:82930943-82979006 | 1364 nt | 0.4384 |
| hsa_LIN54_0000700 | Exon-Exon | chr4:83857134-83858451 | chr4:82935981-82937298 | 313 nt | 0.3962 |
| hsa_LIN54_0002600 | Exon-Exon | chr4:83860692-83861115 | chr4:82939539-82939962 | 272 nt | 0.5074 |
| hsa_LIN54_0002700 | Exon-Exon | chr4:83860692-83891622 | chr4:82939539-82970469 | 632 nt | 0.4668 |
| hsa_LIN54_0003500 | Exon-Exon | chr4:83867411-83867627 | chr4:82946258-82946474 | 217 nt | 0.4747 |
| hsa_LIN54_0003600 | Exon-Exon | chr4:83867411-83891622 | chr4:82946258-82970469 | 360 nt | 0.4361 |
| hsa_LIN54_0003700 | Exon-Exon | chr4:83867411-83900159 | chr4:82946258-82979006 | 484 nt | 0.4339 |
| hsa_LIN54_0004800 | Intron-Exon-Intron | chr4:83882543-83900159 | chr4:82961390-82979006 | 250 nt | 0.3400 |
| hsa_LIN54_0005300 | Exon-Exon | chr4:83891480-83891618 | chr4:82970327-82970465 | 139 nt | 0.3741 |
Showing 1 to 10 of 74 entries
Forensic Context
A study in mice demonstrated that the circLIN54 (circLin54) is significantly up-regulated in primary cortical neurons following methamphetamine treatment, with this expression change validated via high-throughput RNA sequencing and qRT-PCR [Li et al. DOI:10.1016/J.Neulet.2019.02.032].