Basic Information

Symbol
circLIN54
RNA Class
circRNA
Alias
Lin-54 DREAM MuvB Core Complex Component CXCDC1 MIP120 JC8.6 TCX1 CXC Domain-Containing Protein 1 Protein Lin-54 Homolog DKFZp686L1814 Lin-54 Homolog (C. Elegans) CXC Domain Containing 1 Lin-54 Homolog KIAA2037
Location (GRCh37)
4:83838097-83928847 UCSC Genome Browser
Location (GRCh38)
4:82916944-83007694
UCSC Genome Browser Search in Marker Scope
Host gene
LIN54
Host category
mRNA
Forensic tag(s)
Drug abuse diagnoses
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_LIN54_0005400 Exon-Exon chr4:83891480-83891622 chr4:82970327-82970469 143 nt 0.3776
hsa_LIN54_0005500 Exon-Exon chr4:83891480-83900159 chr4:82970327-82979006 267 nt 0.4007
hsa_LIN54_0005600 Exon-Exon chr4:83891480-83906029 chr4:82970327-82984876 983 nt 0.4222
hsa_LIN54_0006000 Exon-Exon chr4:83900036-83906029 chr4:82978883-82984876 840 nt 0.4298
hsa_LIN54_0006500 Exon-Exon chr4:83905314-83906029 chr4:82984161-82984876 716 nt 0.4302
hsa_LIN54_0000100 Exon-Exon chr4:83849209-83852298 chr4:82928056-82931145 203 nt 0.4138
hsa_chr4_0604000 Intergenic-Intergenic chr4:83849511-83851534 chr4:82928358-82930381 2024 nt 0.3824
hsa_LIN54_0000400 Exon-Exon chr4:83852096-83861115 chr4:82930943-82939962 272 nt 0.5074
hsa_LIN54_0000500 Exon-Exon chr4:83852096-83891622 chr4:82930943-82970469 203 nt 0.4138
hsa_LIN54_0000600 Exon-Exon chr4:83852096-83906029 chr4:82930943-82984876 59 nt 0.5424
Showing 11 to 20 of 74 entries
Forensic Context

A study in mice demonstrated that the circLIN54 (circLin54) is significantly up-regulated in primary cortical neurons following methamphetamine treatment, with this expression change validated via high-throughput RNA sequencing and qRT-PCR [Li et al. DOI:10.1016/J.Neulet.2019.02.032].