Basic Information
Symbol
circLIN54
RNA Class
circRNA
Alias
Lin-54 DREAM MuvB Core Complex Component
CXCDC1
MIP120
JC8.6
TCX1
CXC Domain-Containing Protein 1
Protein Lin-54 Homolog
DKFZp686L1814
Lin-54 Homolog (C. Elegans)
CXC Domain Containing 1
Lin-54 Homolog
KIAA2037
Location (GRCh37)
4:83838097-83928847
UCSC Genome Browser
Location (GRCh38)
4:82916944-83007694
Host gene
LIN54
Host category
mRNA
Forensic tag(s)
Drug abuse diagnoses
External database
Transcripts
| ID | Type | Location (GRCh37) | Location (GRCh38) | Length | GC content |
|---|---|---|---|---|---|
| hsa_LIN54_0000800 | Exon-Exon | chr4:83857134-83861115 | chr4:82935981-82939962 | 80 nt | 0.4625 |
| hsa_LIN54_0000900 | Exon-Exon | chr4:83857134-83867627 | chr4:82935981-82946474 | 458 nt | 0.4236 |
| hsa_LIN54_0001000 | Exon-Exon | chr4:83857134-83891622 | chr4:82935981-82970469 | 373 nt | 0.4155 |
| hsa_LIN54_0001100 | Exon-Exon | chr4:83857134-83900159 | chr4:82935981-82979006 | 365 nt | 0.3945 |
| hsa_LIN54_0001200 | Exon-Exon | chr4:83857134-83906029 | chr4:82935981-82984876 | 228 nt | 0.4518 |
| hsa_LIN54_0001300 | Exon-Exon | chr4:83857432-83860889 | chr4:82936279-82939736 | 290 nt | 0.5000 |
| hsa_LIN54_0001400 | Exon-Exon | chr4:83857432-83867627 | chr4:82936279-82946474 | 109 nt | 0.3303 |
| hsa_LIN54_0001500 | Exon-Exon | chr4:83857432-83891622 | chr4:82936279-82970469 | 103 nt | 0.3107 |
| hsa_LIN54_0001600 | Exon-Exon | chr4:83857432-83900159 | chr4:82936279-82979006 | 175 nt | 0.3714 |
| hsa_LIN54_0001700 | Exon-Exon | chr4:83857432-83906029 | chr4:82936279-82984876 | 156 nt | 0.3910 |
Showing 21 to 30 of 74 entries
Forensic Context
A study in mice demonstrated that the circLIN54 (circLin54) is significantly up-regulated in primary cortical neurons following methamphetamine treatment, with this expression change validated via high-throughput RNA sequencing and qRT-PCR [Li et al. DOI:10.1016/J.Neulet.2019.02.032].