Basic Information

Symbol
circLIN54
RNA Class
circRNA
Alias
Lin-54 DREAM MuvB Core Complex Component CXCDC1 MIP120 JC8.6 TCX1 CXC Domain-Containing Protein 1 Protein Lin-54 Homolog DKFZp686L1814 Lin-54 Homolog (C. Elegans) CXC Domain Containing 1 Lin-54 Homolog KIAA2037
Location (GRCh37)
4:83838097-83928847 UCSC Genome Browser
Location (GRCh38)
4:82916944-83007694
UCSC Genome Browser Search in Marker Scope
Host gene
LIN54
Host category
mRNA
Forensic tag(s)
Drug abuse diagnoses
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_LIN54_0001800 Exon-Exon chr4:83858380-83860889 chr4:82937227-82939736 362 nt 0.4917
hsa_LIN54_0001900 Exon-Exon chr4:83858380-83861115 chr4:82937227-82939962 146 nt 0.4658
hsa_LIN54_0002000 Exon-Exon chr4:83858380-83867627 chr4:82937227-82946474 289 nt 0.4706
hsa_LIN54_0002100 Exon-Exon chr4:83858380-83891622 chr4:82937227-82970469 74 nt 0.4730
hsa_LIN54_0002300 Exon-Exon chr4:83859566-83861115 chr4:82938413-82939962 74 nt 0.4730
hsa_LIN54_0002200 Exon-Exon chr4:83859566-83867627 chr4:82938413-82946474 581 nt 0.4871
hsa_LIN54_0002400 Intron-Exon-Intron chr4:83859566-83902628 chr4:82938413-82981475 92 nt 0.4565
hsa_LIN54_0002500 Intron-Intron chr4:83859710-83860691 chr4:82938557-82939538 982 nt 0.3340
hsa_LIN54_0002800 Exon-Exon chr4:83860692-83860889 chr4:82939539-82939736 198 nt 0.5202
hsa_LIN54_0002900 Exon-Exon chr4:83860692-83867627 chr4:82939539-82946474 489 nt 0.4928
Showing 31 to 40 of 74 entries
Forensic Context

A study in mice demonstrated that the circLIN54 (circLin54) is significantly up-regulated in primary cortical neurons following methamphetamine treatment, with this expression change validated via high-throughput RNA sequencing and qRT-PCR [Li et al. DOI:10.1016/J.Neulet.2019.02.032].