Basic Information

Symbol
circLIN54
RNA Class
circRNA
Alias
Lin-54 DREAM MuvB Core Complex Component CXCDC1 MIP120 JC8.6 TCX1 CXC Domain-Containing Protein 1 Protein Lin-54 Homolog DKFZp686L1814 Lin-54 Homolog (C. Elegans) CXC Domain Containing 1 Lin-54 Homolog KIAA2037
Location (GRCh37)
4:83838097-83928847 UCSC Genome Browser
Location (GRCh38)
4:82916944-83007694
UCSC Genome Browser Search in Marker Scope
Host gene
LIN54
Host category
mRNA
Forensic tag(s)
Drug abuse diagnoses
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_LIN54_0004300 Intron-Exon-Intron chr4:83872004-83900159 chr4:82950851-82979006 250 nt 0.2800
hsa_LIN54_0004400 Intron-Exon-Intron chr4:83872004-83906029 chr4:82950851-82984876 90 nt 0.4889
hsa_LIN54_0004600 Intron-Exon-Intron chr4:83874341-83891622 chr4:82953188-82970469 203 nt 0.4975
hsa_LIN54_0004500 Intron-Exon-Intron chr4:83874341-83900159 chr4:82953188-82979006 250 nt 0.3960
hsa_LIN54_0004700 Intron-Intron chr4:83876076-83876305 chr4:82954923-82955152 230 nt 0.3739
hsa_LIN54_0004900 Intron-Exon-Intron chr4:83882543-83891622 chr4:82961390-82970469 230 nt 0.3870
hsa_LIN54_0005000 Intron-Exon-Intron chr4:83882543-83902628 chr4:82961390-82981475 345 nt 0.4232
hsa_LIN54_0005100 Intron-Exon-Intron chr4:83882543-83906029 chr4:82961390-82984876 59 nt 0.5424
hsa_LIN54_0005200 Intron-Exon-Intron chr4:83888056-83900831 chr4:82966903-82979678 250 nt 0.3480
hsa_LIN54_0005800 Intron-Exon-Intron chr4:83891480-83892801 chr4:82970327-82971648 1322 nt 0.3691
Showing 51 to 60 of 74 entries
Forensic Context

A study in mice demonstrated that the circLIN54 (circLin54) is significantly up-regulated in primary cortical neurons following methamphetamine treatment, with this expression change validated via high-throughput RNA sequencing and qRT-PCR [Li et al. DOI:10.1016/J.Neulet.2019.02.032].