Basic Information

Symbol
circLIN54
RNA Class
circRNA
Alias
Lin-54 DREAM MuvB Core Complex Component CXCDC1 MIP120 JC8.6 TCX1 CXC Domain-Containing Protein 1 Protein Lin-54 Homolog DKFZp686L1814 Lin-54 Homolog (C. Elegans) CXC Domain Containing 1 Lin-54 Homolog KIAA2037
Location (GRCh37)
4:83838097-83928847 UCSC Genome Browser
Location (GRCh38)
4:82916944-83007694
UCSC Genome Browser Search in Marker Scope
Host gene
LIN54
Host category
mRNA
Forensic tag(s)
Drug abuse diagnoses
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_LIN54_0005900 Intron-Exon-Intron chr4:83891480-83902628 chr4:82970327-82981475 401 nt 0.4115
hsa_LIN54_0005700 Intron-Exon-Intron chr4:83891480-83903169 chr4:82970327-82982016 250 nt 0.3760
hsa_chr4_0604200 Intergenic-Intergenic chr4:83896633-83905386 chr4:82975480-82984233 250 nt 0.3640
hsa_LIN54_0006100 Intron-Exon-Intron chr4:83900036-83902628 chr4:82978883-82981475 258 nt 0.4302
hsa_LIN54_0006200 Exon-Exon chr4:83900036-83905534 chr4:82978883-82984381 124 nt 0.4274
hsa_LIN54_0006300 Intron-Exon-Intron chr4:83900036-83927754 chr4:82978883-83006601 177 nt 0.4633
hsa_LIN54_0006400 Intron-Exon-Intron chr4:83902495-83906029 chr4:82981342-82984876 134 nt 0.4328
hsa_LIN54_0006600 Intron-Exon-Intron chr4:83905314-83919940 chr4:82984161-82998787 250 nt 0.3040
hsa_LIN54_0006700 Intron-Intron chr4:83917790-83918952 chr4:82996637-82997799 1163 nt 0.3577
hsa_LIN54_0006800 Intron-Intron chr4:83924399-83928847 chr4:83003246-83007694 250 nt 0.4120
Showing 61 to 70 of 74 entries
Forensic Context

A study in mice demonstrated that the circLIN54 (circLin54) is significantly up-regulated in primary cortical neurons following methamphetamine treatment, with this expression change validated via high-throughput RNA sequencing and qRT-PCR [Li et al. DOI:10.1016/J.Neulet.2019.02.032].