Basic Information
Symbol
circLIN54
RNA Class
circRNA
Alias
Lin-54 DREAM MuvB Core Complex Component
CXCDC1
MIP120
JC8.6
TCX1
CXC Domain-Containing Protein 1
Protein Lin-54 Homolog
DKFZp686L1814
Lin-54 Homolog (C. Elegans)
CXC Domain Containing 1
Lin-54 Homolog
KIAA2037
Location (GRCh37)
4:83838097-83928847
UCSC Genome Browser
Location (GRCh38)
4:82916944-83007694
Host gene
LIN54
Host category
mRNA
Forensic tag(s)
Drug abuse diagnoses
External database
Transcripts
| ID | Type | Location (GRCh37) | Location (GRCh38) | Length | GC content |
|---|---|---|---|---|---|
| hsa_LIN54_0006900 | Intron-Intron | chr4:83924768-83928265 | chr4:83003615-83007112 | 250 nt | 0.4440 |
| hsa_RNU6-615P_0000100 | Intergenic-Exon-Intergenic | chr4:83922784-83925914 | chr4:83001631-83004761 | 250 nt | 0.3960 |
| hsa_THAP9_0001400 | Exon-Intergenic | chr4:83838097-83841836 | chr4:82916944-82920683 | 250 nt | 0.2960 |
| hsa_THAP9_0001700 | Exon-Intergenic | chr4:83840649-83841173 | chr4:82919496-82920020 | 525 nt | 0.3467 |
Showing 71 to 74 of 74 entries
Forensic Context
A study in mice demonstrated that the circLIN54 (circLin54) is significantly up-regulated in primary cortical neurons following methamphetamine treatment, with this expression change validated via high-throughput RNA sequencing and qRT-PCR [Li et al. DOI:10.1016/J.Neulet.2019.02.032].