Basic Information
Symbol
circLRCH3
RNA Class
circRNA
Alias
Leucine Rich Repeats And Calponin Homology Domain Containing 3
Leucine-Rich Repeat And Calponin Homology Domain-Containing Protein 3
Leucine-Rich Repeats And Calponin Homology (CH) Domain Containing 3
DISP Complex Protein LRCH3
MGC4126
Location (GRCh37)
3:197483297-197613501
UCSC Genome Browser
Location (GRCh38)
3:197756426-197886630
Host gene
LRCH3
Host category
mRNA
Forensic tag(s)
Postmortem interval inference
External database
Transcripts
| ID | Type | Location (GRCh37) | Location (GRCh38) | Length | GC content |
|---|---|---|---|---|---|
| hsa_LRCH3_0000800 | Intron-Exon-Intron | chr3:197529729-197547301 | chr3:197802858-197820430 | 250 nt | 0.3360 |
| hsa_LRCH3_0001400 | Intron-Exon-Intron | chr3:197531506-197547301 | chr3:197804635-197820430 | 250 nt | 0.3160 |
| hsa_LRCH3_0002100 | Exon-Exon | chr3:197541779-197544173 | chr3:197814908-197817302 | 272 nt | 0.3603 |
| hsa_LRCH3_0002200 | Exon-Exon | chr3:197541779-197547301 | chr3:197814908-197820430 | 378 nt | 0.3730 |
| hsa_LRCH3_0002300 | Exon-Exon | chr3:197541779-197553885 | chr3:197814908-197827014 | 515 nt | 0.3961 |
| hsa_LRCH3_0002400 | Exon-Exon | chr3:197541779-197556544 | chr3:197814908-197829673 | 625 nt | 0.3968 |
| hsa_LRCH3_0002500 | Exon-Exon | chr3:197541779-197557734 | chr3:197814908-197830863 | 719 nt | 0.4061 |
| hsa_LRCH3_0002600 | Exon-Exon | chr3:197541779-197559188 | chr3:197814908-197832317 | 840 nt | 0.4131 |
| hsa_LRCH3_0002700 | Exon-Exon | chr3:197541779-197566268 | chr3:197814908-197839397 | 1066 nt | 0.4240 |
| hsa_LRCH3_0002800 | Exon-Exon | chr3:197541779-197574892 | chr3:197814908-197848021 | 1268 nt | 0.4385 |
Showing 1 to 10 of 219 entries
Forensic Context
A study in mice demonstrated that the circLRCH3 was initially checked by RT-qPCR as a potential reference gene for postmortem interval (PMI) estimation but was not selected for the final stability analysis because its content was not confluent enough [Tu et al. DOI:10.1007/s12024-018-9973-y].