Basic Information
Symbol
circLRCH3
RNA Class
circRNA
Alias
Leucine Rich Repeats And Calponin Homology Domain Containing 3
Leucine-Rich Repeat And Calponin Homology Domain-Containing Protein 3
Leucine-Rich Repeats And Calponin Homology (CH) Domain Containing 3
DISP Complex Protein LRCH3
MGC4126
Location (GRCh37)
3:197483297-197613501
UCSC Genome Browser
Location (GRCh38)
3:197756426-197886630
Host gene
LRCH3
Host category
mRNA
Forensic tag(s)
Postmortem interval inference
External database
Transcripts
| ID | Type | Location (GRCh37) | Location (GRCh38) | Length | GC content |
|---|---|---|---|---|---|
| hsa_LRCH3_0008000 | Exon-Exon | chr3:197553749-197592342 | chr3:197826878-197865471 | 199 nt | 0.4874 |
| hsa_LRCH3_0007500 | Exon-Exon | chr3:197553749-197598333 | chr3:197826878-197871462 | 1490 nt | 0.4732 |
| hsa_LRCH3_0008200 | Exon-Intron | chr3:197553831-197554092 | chr3:197826960-197827221 | 262 nt | 0.4695 |
| hsa_chr3_0498200 | Intergenic-Intergenic | chr3:197555825-197556261 | chr3:197828954-197829390 | 437 nt | 0.3387 |
| hsa_LRCH3_0008800 | Exon-Exon | chr3:197556435-197557734 | chr3:197829564-197830863 | 116 nt | 0.3879 |
| hsa_LRCH3_0008600 | Exon-Exon | chr3:197556435-197559188 | chr3:197829564-197832317 | 325 nt | 0.4400 |
| hsa_LRCH3_0008900 | Exon-Exon | chr3:197556435-197562693 | chr3:197829564-197835822 | 149 nt | 0.5168 |
| hsa_LRCH3_0009000 | Exon-Exon | chr3:197556435-197574331 | chr3:197829564-197847460 | 58 nt | 0.4828 |
| hsa_LRCH3_0009100 | Exon-Exon | chr3:197556435-197585776 | chr3:197829564-197858905 | 276 nt | 0.4601 |
| hsa_LRCH3_0009200 | Exon-Exon | chr3:197556435-197598333 | chr3:197829564-197871462 | 119 nt | 0.4454 |
Showing 131 to 140 of 219 entries
Forensic Context
A study in mice demonstrated that the circLRCH3 was initially checked by RT-qPCR as a potential reference gene for postmortem interval (PMI) estimation but was not selected for the final stability analysis because its content was not confluent enough [Tu et al. DOI:10.1007/s12024-018-9973-y].