Basic Information
Symbol
circLRCH3
RNA Class
circRNA
Alias
Leucine Rich Repeats And Calponin Homology Domain Containing 3
Leucine-Rich Repeat And Calponin Homology Domain-Containing Protein 3
Leucine-Rich Repeats And Calponin Homology (CH) Domain Containing 3
DISP Complex Protein LRCH3
MGC4126
Location (GRCh37)
3:197483297-197613501
UCSC Genome Browser
Location (GRCh38)
3:197756426-197886630
Host gene
LRCH3
Host category
mRNA
Forensic tag(s)
Postmortem interval inference
External database
Transcripts
| ID | Type | Location (GRCh37) | Location (GRCh38) | Length | GC content |
|---|---|---|---|---|---|
| hsa_LRCH3_0002900 | Exon-Exon | chr3:197541779-197579491 | chr3:197814908-197852620 | 1328 nt | 0.4405 |
| hsa_LRCH3_0003000 | Exon-Exon | chr3:197541779-197581316 | chr3:197814908-197854445 | 1382 nt | 0.4443 |
| hsa_LRCH3_0003100 | Exon-Exon | chr3:197541779-197593090 | chr3:197814908-197866219 | 1611 nt | 0.4507 |
| hsa_LRCH3_0003200 | Exon-Exon | chr3:197541779-197602646 | chr3:197814908-197875775 | 1946 nt | 0.4507 |
| hsa_LRCH3_0004400 | Exon-Exon | chr3:197544047-197544173 | chr3:197817176-197817302 | 127 nt | 0.3780 |
| hsa_LRCH3_0004500 | Exon-Exon | chr3:197544047-197547301 | chr3:197817176-197820430 | 233 nt | 0.3906 |
| hsa_LRCH3_0004600 | Exon-Exon | chr3:197544047-197557734 | chr3:197817176-197830863 | 574 nt | 0.4216 |
| hsa_LRCH3_0004700 | Exon-Exon | chr3:197544047-197581316 | chr3:197817176-197854445 | 1237 nt | 0.4559 |
| hsa_LRCH3_0005600 | Exon-Exon | chr3:197547196-197547301 | chr3:197820325-197820430 | 106 nt | 0.4057 |
| hsa_LRCH3_0005700 | Exon-Exon | chr3:197547196-197553885 | chr3:197820325-197827014 | 243 nt | 0.4362 |
Showing 11 to 20 of 219 entries
Forensic Context
A study in mice demonstrated that the circLRCH3 was initially checked by RT-qPCR as a potential reference gene for postmortem interval (PMI) estimation but was not selected for the final stability analysis because its content was not confluent enough [Tu et al. DOI:10.1007/s12024-018-9973-y].