Basic Information
Symbol
circLRCH3
RNA Class
circRNA
Alias
Leucine Rich Repeats And Calponin Homology Domain Containing 3
Leucine-Rich Repeat And Calponin Homology Domain-Containing Protein 3
Leucine-Rich Repeats And Calponin Homology (CH) Domain Containing 3
DISP Complex Protein LRCH3
MGC4126
Location (GRCh37)
3:197483297-197613501
UCSC Genome Browser
Location (GRCh38)
3:197756426-197886630
Host gene
LRCH3
Host category
mRNA
Forensic tag(s)
Postmortem interval inference
External database
Transcripts
| ID | Type | Location (GRCh37) | Location (GRCh38) | Length | GC content |
|---|---|---|---|---|---|
| hsa_LRCH3_0005800 | Exon-Exon | chr3:197547196-197557734 | chr3:197820325-197830863 | 447 nt | 0.4340 |
| hsa_LRCH3_0005900 | Exon-Exon | chr3:197547196-197559188 | chr3:197820325-197832317 | 568 nt | 0.4384 |
| hsa_LRCH3_0006000 | Exon-Exon | chr3:197547196-197566268 | chr3:197820325-197839397 | 794 nt | 0.4458 |
| hsa_LRCH3_0006800 | Exon-Exon | chr3:197553749-197593090 | chr3:197826878-197866219 | 1233 nt | 0.4745 |
| hsa_LRCH3_0008100 | Exon-Exon | chr3:197553749-197602646 | chr3:197826878-197875775 | 250 nt | 0.3360 |
| hsa_LRCH3_0008300 | Exon-Exon | chr3:197556435-197566268 | chr3:197829564-197839397 | 551 nt | 0.4501 |
| hsa_LRCH3_0008400 | Exon-Exon | chr3:197556435-197592342 | chr3:197829564-197865471 | 988 nt | 0.4747 |
| hsa_LRCH3_0008500 | Exon-Exon | chr3:197556435-197593090 | chr3:197829564-197866219 | 1096 nt | 0.4763 |
| hsa_LRCH3_0009700 | Exon-Exon | chr3:197557641-197559188 | chr3:197830770-197832317 | 215 nt | 0.4605 |
| hsa_LRCH3_0009800 | Exon-Exon | chr3:197557641-197562693 | chr3:197830770-197835822 | 364 nt | 0.4835 |
Showing 21 to 30 of 219 entries
Forensic Context
A study in mice demonstrated that the circLRCH3 was initially checked by RT-qPCR as a potential reference gene for postmortem interval (PMI) estimation but was not selected for the final stability analysis because its content was not confluent enough [Tu et al. DOI:10.1007/s12024-018-9973-y].