Basic Information
Symbol
circLRCH3
RNA Class
circRNA
Alias
Leucine Rich Repeats And Calponin Homology Domain Containing 3
Leucine-Rich Repeat And Calponin Homology Domain-Containing Protein 3
Leucine-Rich Repeats And Calponin Homology (CH) Domain Containing 3
DISP Complex Protein LRCH3
MGC4126
Location (GRCh37)
3:197483297-197613501
UCSC Genome Browser
Location (GRCh38)
3:197756426-197886630
Host gene
LRCH3
Host category
mRNA
Forensic tag(s)
Postmortem interval inference
External database
Transcripts
| ID | Type | Location (GRCh37) | Location (GRCh38) | Length | GC content |
|---|---|---|---|---|---|
| hsa_LRCH3_0019600 | Exon-Exon | chr3:197597031-197598333 | chr3:197870160-197871462 | 257 nt | 0.4669 |
| hsa_LRCH3_0020000 | Exon-Exon | chr3:197597031-197602646 | chr3:197870160-197875775 | 250 nt | 0.3360 |
| hsa_LRCH3_0020400 | Intron-Intron | chr3:197599955-197600099 | chr3:197873084-197873228 | 145 nt | 0.4069 |
| hsa_AC055764.1_0000100 | Intergenic-Exon-Intergenic | chr3:197553835-197592327 | chr3:197826964-197865456 | 1024 nt | 0.4746 |
| hsa_AC055764.1_0000200 | Intergenic-Exon | chr3:197557202-197557768 | chr3:197830331-197830897 | 567 nt | 0.3616 |
| hsa_AC055764.1_0000300 | Exon-Intergenic | chr3:197557908-197561496 | chr3:197831037-197834625 | 250 nt | 0.3680 |
| hsa_AC144530.1_0000100 | Intergenic-Exon-Intergenic | chr3:197561399-197588158 | chr3:197834528-197861287 | 428 nt | 0.4369 |
| hsa_AC144530.1_0000200 | Intergenic-Exon-Intergenic | chr3:197562574-197610626 | chr3:197835703-197883755 | 78 nt | 0.3974 |
| hsa_AC144530.1_0000300 | Intergenic-Exon-Intergenic | chr3:197574312-197592327 | chr3:197847441-197865456 | 390 nt | 0.5000 |
| hsa_LRCH3_0000600 | Intron-Exon-Intron | chr3:197519212-197547301 | chr3:197792341-197820430 | 322 nt | 0.3540 |
Showing 71 to 80 of 219 entries
Forensic Context
A study in mice demonstrated that the circLRCH3 was initially checked by RT-qPCR as a potential reference gene for postmortem interval (PMI) estimation but was not selected for the final stability analysis because its content was not confluent enough [Tu et al. DOI:10.1007/s12024-018-9973-y].