Basic Information
Symbol
circLRCH3
RNA Class
circRNA
Alias
Leucine Rich Repeats And Calponin Homology Domain Containing 3
Leucine-Rich Repeat And Calponin Homology Domain-Containing Protein 3
Leucine-Rich Repeats And Calponin Homology (CH) Domain Containing 3
DISP Complex Protein LRCH3
MGC4126
Location (GRCh37)
3:197483297-197613501
UCSC Genome Browser
Location (GRCh38)
3:197756426-197886630
Host gene
LRCH3
Host category
mRNA
Forensic tag(s)
Postmortem interval inference
External database
Transcripts
| ID | Type | Location (GRCh37) | Location (GRCh38) | Length | GC content |
|---|---|---|---|---|---|
| hsa_chr3_0498000 | Intergenic-Intergenic | chr3:197519393-197535656 | chr3:197792522-197808785 | 250 nt | 0.3520 |
| hsa_LRCH3_0000700 | Intron-Exon-Intron | chr3:197526968-197544786 | chr3:197800097-197817915 | 250 nt | 0.4160 |
| hsa_LRCH3_0000900 | Intron-Exon-Intron | chr3:197529729-197541923 | chr3:197802858-197815052 | 250 nt | 0.2960 |
| hsa_LRCH3_0001200 | Intron-Exon-Intron | chr3:197529729-197544173 | chr3:197802858-197817302 | 133 nt | 0.3835 |
| hsa_LRCH3_0001300 | Intron-Exon-Intron | chr3:197529729-197556544 | chr3:197802858-197829673 | 272 nt | 0.3603 |
| hsa_LRCH3_0001000 | Intron-Exon-Intron | chr3:197529729-197579491 | chr3:197802858-197852620 | 250 nt | 0.3680 |
| hsa_LRCH3_0001100 | Intron-Exon-Intron | chr3:197529729-197593090 | chr3:197802858-197866219 | 250 nt | 0.3800 |
| hsa_LRCH3_0001500 | Intron-Exon-Intron | chr3:197531506-197556544 | chr3:197804635-197829673 | 250 nt | 0.3280 |
| hsa_LRCH3_0001600 | Intron-Exon-Intron | chr3:197531506-197566268 | chr3:197804635-197839397 | 77 nt | 0.3636 |
| hsa_LRCH3_0001700 | Intron-Exon-Intron | chr3:197531538-197547301 | chr3:197804667-197820430 | 88 nt | 0.4205 |
Showing 81 to 90 of 219 entries
Forensic Context
A study in mice demonstrated that the circLRCH3 was initially checked by RT-qPCR as a potential reference gene for postmortem interval (PMI) estimation but was not selected for the final stability analysis because its content was not confluent enough [Tu et al. DOI:10.1007/s12024-018-9973-y].