Basic Information
Symbol
circABCA1
RNA Class
circRNA
Alias
ATP Binding Cassette Subfamily A Member 1
ABC1
TGD
ATP-Binding Cassette, Sub-Family A (ABC1), Member 1
ATP-Binding Cassette Sub-Family A Member 1
Phospholipid-Transporting ATPase ABCA1
Cholesterol Efflux Regulatory Protein
HDLDT1
ABC-1
CERP
ATP-Binding Cassette Transporter A1
ATP-Binding Cassette Transporter 1
ATP-Binding Cassette 1
Tangier Disease
Membrane-Bound
EC 3.6.3.41
EC 7.6.2.1
EC 2.8.1.8
EC 2.7.7.8
HDLCQTL13
EC 3.6.3
HPALP1
Location (GRCh37)
9:107543284-107690527
UCSC Genome Browser
Location (GRCh38)
9:104781003-104928246
Host gene
ABCA1
Host category
mRNA
Forensic tag(s)
Other applications
External database
Transcripts
| ID | Type | Location (GRCh37) | Location (GRCh38) | Length | GC content |
|---|---|---|---|---|---|
| hsa_ABCA1_0000100 | Exon-Exon | chr9:107543284-107560879 | chr9:104781003-104798598 | 250 nt | 0.3160 |
| hsa_ABCA1_0000200 | Exon-Exon | chr9:107547677-107591419 | chr9:104785396-104829138 | 250 nt | 0.3920 |
| hsa_ABCA1_0001500 | Exon-Exon | chr9:107550707-107565597 | chr9:104788426-104803316 | 1510 nt | 0.4722 |
| hsa_ABCA1_0001800 | Exon-Exon | chr9:107553203-107575003 | chr9:104790922-104812722 | 2026 nt | 0.4896 |
| hsa_ABCA1_0002400 | Exon-Exon | chr9:107555452-107562865 | chr9:104793171-104800584 | 938 nt | 0.4883 |
| hsa_ABCA1_0002500 | Exon-Exon | chr9:107555452-107595052 | chr9:104793171-104832771 | 250 nt | 0.4240 |
| hsa_ABCA1_0003200 | Exon-Exon | chr9:107560702-107576512 | chr9:104798421-104814231 | 1334 nt | 0.5000 |
| hsa_ABCA1_0003300 | Exon-Exon | chr9:107560702-107588168 | chr9:104798421-104825887 | 2784 nt | 0.5165 |
| hsa_ABCA1_0003600 | Exon-Exon | chr9:107562100-107588168 | chr9:104799819-104825887 | 2606 nt | 0.5184 |
| hsa_ABCA1_0004100 | Exon-Exon | chr9:107564335-107567001 | chr9:104802054-104804720 | 234 nt | 0.4231 |
Showing 1 to 10 of 187 entries
Forensic Context
A study in mice demonstrated that the circABCA1 is significantly upregulated in spinal cord tissue after traumatic injury and functions as a core component of a regulatory axis, where it binds miR-135b-5p to influence KLF4 expression [Wang et al. DOI:10.4103/1673-5374.308100]. In a rat model of radiation-induced lung injury, single-cell transcriptomic analysis identified the orthologous gene associated with the circABCA1 as being involved in inflammatory processes [Shi et al. DOI:10.17305/bb.2024.10357].