Basic Information

Symbol
circABCA1
RNA Class
circRNA
Alias
ATP Binding Cassette Subfamily A Member 1 ABC1 TGD ATP-Binding Cassette, Sub-Family A (ABC1), Member 1 ATP-Binding Cassette Sub-Family A Member 1 Phospholipid-Transporting ATPase ABCA1 Cholesterol Efflux Regulatory Protein HDLDT1 ABC-1 CERP ATP-Binding Cassette Transporter A1 ATP-Binding Cassette Transporter 1 ATP-Binding Cassette 1 Tangier Disease Membrane-Bound EC 3.6.3.41 EC 7.6.2.1 EC 2.8.1.8 EC 2.7.7.8 HDLCQTL13 EC 3.6.3 HPALP1
Location (GRCh37)
9:107543284-107690527 UCSC Genome Browser
Location (GRCh38)
9:104781003-104928246
UCSC Genome Browser Search in Marker Scope
Host gene
ABCA1
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_ABCA1_0006800 Exon-Exon chr9:107579613-107582004 chr9:104817332-104819723 432 nt 0.5347
hsa_ABCA1_0007000 Intron-Intron chr9:107579988-107580233 chr9:104817707-104817952 246 nt 0.4268
hsa_ABCA1_0007300 Exon-Exon chr9:107580944-107582004 chr9:104818663-104819723 359 nt 0.5265
hsa_ABCA1_0007400 Exon-Exon chr9:107580944-107589450 chr9:104818663-104827169 1347 nt 0.5353
hsa_ABCA1_0007200 Exon-Exon chr9:107580944-107602800 chr9:104818663-104840519 2649 nt 0.5251
hsa_ABCA1_0007500 Exon-Exon chr9:107581121-107645438 chr9:104818840-104883157 125 nt 0.4880
hsa_ABCA1_0007600 Intron-Intron chr9:107581285-107581770 chr9:104819004-104819489 486 nt 0.4444
hsa_chr9_0039800 Intergenic-Intergenic chr9:107584819-107585126 chr9:104822538-104822845 308 nt 0.5065
hsa_chr9_0039900 Intergenic-Intergenic chr9:107585085-107585481 chr9:104822804-104823200 397 nt 0.3804
hsa_ABCA1_0007800 Intron-Exon-Intron chr9:107586709-107587039 chr9:104824428-104824758 331 nt 0.4773
Showing 91 to 100 of 187 entries
Forensic Context

A study in mice demonstrated that the circABCA1 is significantly upregulated in spinal cord tissue after traumatic injury and functions as a core component of a regulatory axis, where it binds miR-135b-5p to influence KLF4 expression [Wang et al. DOI:10.4103/1673-5374.308100]. In a rat model of radiation-induced lung injury, single-cell transcriptomic analysis identified the orthologous gene associated with the circABCA1 as being involved in inflammatory processes [Shi et al. DOI:10.17305/bb.2024.10357].