Basic Information

Symbol
circABCA1
RNA Class
circRNA
Alias
ATP Binding Cassette Subfamily A Member 1 ABC1 TGD ATP-Binding Cassette, Sub-Family A (ABC1), Member 1 ATP-Binding Cassette Sub-Family A Member 1 Phospholipid-Transporting ATPase ABCA1 Cholesterol Efflux Regulatory Protein HDLDT1 ABC-1 CERP ATP-Binding Cassette Transporter A1 ATP-Binding Cassette Transporter 1 ATP-Binding Cassette 1 Tangier Disease Membrane-Bound EC 3.6.3.41 EC 7.6.2.1 EC 2.8.1.8 EC 2.7.7.8 HDLCQTL13 EC 3.6.3 HPALP1
Location (GRCh37)
9:107543284-107690527 UCSC Genome Browser
Location (GRCh38)
9:104781003-104928246
UCSC Genome Browser Search in Marker Scope
Host gene
ABCA1
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_chr9_0040000 Intergenic-Intergenic chr9:107586731-107587261 chr9:104824450-104824980 531 nt 0.4633
hsa_ABCA1_0007900 Exon-Exon chr9:107586746-107589340 chr9:104824465-104827059 431 nt 0.5290
hsa_ABCA1_0008000 Exon-Exon chr9:107586746-107593382 chr9:104824465-104831101 941 nt 0.5356
hsa_ABCA1_0008100 Exon-Exon chr9:107586746-107607850 chr9:104824465-104845569 334 nt 0.5120
hsa_chr9_0040100 Intergenic-Intergenic chr9:107588011-107588284 chr9:104825730-104826003 274 nt 0.4489
hsa_ABCA1_0008300 Exon-Exon chr9:107589229-107624081 chr9:104826948-104861800 1916 nt 0.5099
hsa_chr9_0040200 Intergenic-Intergenic chr9:107589334-107594887 chr9:104827053-104832606 756 nt 0.5212
hsa_ABCA1_0008400 Intron-Exon chr9:107590803-107593291 chr9:104828522-104831010 703 nt 0.4893
hsa_ABCA1_0008500 Exon-Exon chr9:107591197-107607850 chr9:104828916-104845569 93 nt 0.5161
hsa_ABCA1_0008600 Exon-Exon chr9:107591353-107602761 chr9:104829072-104840480 1107 nt 0.5122
Showing 101 to 110 of 187 entries
Forensic Context

A study in mice demonstrated that the circABCA1 is significantly upregulated in spinal cord tissue after traumatic injury and functions as a core component of a regulatory axis, where it binds miR-135b-5p to influence KLF4 expression [Wang et al. DOI:10.4103/1673-5374.308100]. In a rat model of radiation-induced lung injury, single-cell transcriptomic analysis identified the orthologous gene associated with the circABCA1 as being involved in inflammatory processes [Shi et al. DOI:10.17305/bb.2024.10357].