Basic Information

Symbol
circABCA1
RNA Class
circRNA
Alias
ATP Binding Cassette Subfamily A Member 1 ABC1 TGD ATP-Binding Cassette, Sub-Family A (ABC1), Member 1 ATP-Binding Cassette Sub-Family A Member 1 Phospholipid-Transporting ATPase ABCA1 Cholesterol Efflux Regulatory Protein HDLDT1 ABC-1 CERP ATP-Binding Cassette Transporter A1 ATP-Binding Cassette Transporter 1 ATP-Binding Cassette 1 Tangier Disease Membrane-Bound EC 3.6.3.41 EC 7.6.2.1 EC 2.8.1.8 EC 2.7.7.8 HDLCQTL13 EC 3.6.3 HPALP1
Location (GRCh37)
9:107543284-107690527 UCSC Genome Browser
Location (GRCh38)
9:104781003-104928246
UCSC Genome Browser Search in Marker Scope
Host gene
ABCA1
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_ABCA1_0008800 Exon-Exon chr9:107593206-107595052 chr9:104830925-104832771 177 nt 0.5593
hsa_ABCA1_0008900 Exon-Exon chr9:107593206-107624081 chr9:104830925-104861800 177 nt 0.5593
hsa_ABCA1_0008700 Exon-Exon chr9:107593206-107646849 chr9:104830925-104884568 1732 nt 0.4971
hsa_ABCA1_0009000 Exon-Exon chr9:107593304-107594068 chr9:104831023-104831787 245 nt 0.5184
hsa_ABCA1_0009100 Intron-Exon-Intron chr9:107593730-107597592 chr9:104831449-104835311 250 nt 0.2800
hsa_ABCA1_0009200 Exon-Exon chr9:107593903-107594108 chr9:104831622-104831827 206 nt 0.4660
hsa_ABCA1_0009300 Exon-Exon chr9:107593903-107595052 chr9:104831622-104832771 404 nt 0.4876
hsa_ABCA1_0009400 Exon-Exon chr9:107593903-107602800 chr9:104831622-104840519 902 nt 0.5000
hsa_chr9_0040300 Intergenic-Intergenic chr9:107594040-107594915 chr9:104831759-104832634 130 nt 0.4923
hsa_chr9_0040400 Intergenic-Intergenic chr9:107596432-107596586 chr9:104834151-104834305 155 nt 0.3226
Showing 111 to 120 of 187 entries
Forensic Context

A study in mice demonstrated that the circABCA1 is significantly upregulated in spinal cord tissue after traumatic injury and functions as a core component of a regulatory axis, where it binds miR-135b-5p to influence KLF4 expression [Wang et al. DOI:10.4103/1673-5374.308100]. In a rat model of radiation-induced lung injury, single-cell transcriptomic analysis identified the orthologous gene associated with the circABCA1 as being involved in inflammatory processes [Shi et al. DOI:10.17305/bb.2024.10357].