Basic Information

Symbol
circABCA1
RNA Class
circRNA
Alias
ATP Binding Cassette Subfamily A Member 1 ABC1 TGD ATP-Binding Cassette, Sub-Family A (ABC1), Member 1 ATP-Binding Cassette Sub-Family A Member 1 Phospholipid-Transporting ATPase ABCA1 Cholesterol Efflux Regulatory Protein HDLDT1 ABC-1 CERP ATP-Binding Cassette Transporter A1 ATP-Binding Cassette Transporter 1 ATP-Binding Cassette 1 Tangier Disease Membrane-Bound EC 3.6.3.41 EC 7.6.2.1 EC 2.8.1.8 EC 2.7.7.8 HDLCQTL13 EC 3.6.3 HPALP1
Location (GRCh37)
9:107543284-107690527 UCSC Genome Browser
Location (GRCh38)
9:104781003-104928246
UCSC Genome Browser Search in Marker Scope
Host gene
ABCA1
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_ABCA1_0009500 Intron-Exon-Intron chr9:107599178-107599708 chr9:104836897-104837427 531 nt 0.5386
hsa_ABCA1_0009600 Exon-Exon chr9:107599261-107602800 chr9:104836980-104840519 117 nt 0.5299
hsa_ABCA1_0009700 Exon-Exon chr9:107599261-107607850 chr9:104836980-104845569 350 nt 0.5114
hsa_ABCA1_0009800 Exon-Exon chr9:107599261-107624081 chr9:104836980-104861800 123 nt 0.5203
hsa_ABCA1_0009900 Intron-Exon-Intron chr9:107599261-107668479 chr9:104836980-104906198 257 nt 0.5097
hsa_chr9_0040500 Intergenic-Intergenic chr9:107602307-107602861 chr9:104840026-104840580 555 nt 0.5297
hsa_ABCA1_0010000 Exon-Exon chr9:107602560-107602729 chr9:104840279-104840448 170 nt 0.5118
hsa_ABCA1_0010200 Exon-Exon chr9:107602560-107607850 chr9:104840279-104845569 93 nt 0.5161
hsa_ABCA1_0010100 Exon-Exon chr9:107602560-107624081 chr9:104840279-104861800 633 nt 0.4866
hsa_ABCA1_0010300 Intron-Intron chr9:107604495-107605392 chr9:104842214-104843111 898 nt 0.4610
Showing 121 to 130 of 187 entries
Forensic Context

A study in mice demonstrated that the circABCA1 is significantly upregulated in spinal cord tissue after traumatic injury and functions as a core component of a regulatory axis, where it binds miR-135b-5p to influence KLF4 expression [Wang et al. DOI:10.4103/1673-5374.308100]. In a rat model of radiation-induced lung injury, single-cell transcriptomic analysis identified the orthologous gene associated with the circABCA1 as being involved in inflammatory processes [Shi et al. DOI:10.17305/bb.2024.10357].