Basic Information

Symbol
circABCA1
RNA Class
circRNA
Alias
ATP Binding Cassette Subfamily A Member 1 ABC1 TGD ATP-Binding Cassette, Sub-Family A (ABC1), Member 1 ATP-Binding Cassette Sub-Family A Member 1 Phospholipid-Transporting ATPase ABCA1 Cholesterol Efflux Regulatory Protein HDLDT1 ABC-1 CERP ATP-Binding Cassette Transporter A1 ATP-Binding Cassette Transporter 1 ATP-Binding Cassette 1 Tangier Disease Membrane-Bound EC 3.6.3.41 EC 7.6.2.1 EC 2.8.1.8 EC 2.7.7.8 HDLCQTL13 EC 3.6.3 HPALP1
Location (GRCh37)
9:107543284-107690527 UCSC Genome Browser
Location (GRCh38)
9:104781003-104928246
UCSC Genome Browser Search in Marker Scope
Host gene
ABCA1
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_ABCA1_0010400 Intron-Intron chr9:107604859-107605173 chr9:104842578-104842892 315 nt 0.4889
hsa_ABCA1_0010500 Intron-Intron chr9:107607007-107607757 chr9:104844726-104845476 751 nt 0.4194
hsa_ABCA1_0010600 Intron-Intron chr9:107607289-107607484 chr9:104845008-104845203 196 nt 0.4286
hsa_ABCA1_0010800 Exon-Exon chr9:107607758-107624081 chr9:104845477-104861800 122 nt 0.4672
hsa_ABCA1_0010700 Intron-Exon-Intron chr9:107607758-107656268 chr9:104845477-104893987 250 nt 0.3440
hsa_ABCA1_0010900 Intron-Intron chr9:107610819-107612512 chr9:104848538-104850231 1694 nt 0.3985
hsa_ABCA1_0011000 Intron-Exon chr9:107615485-107620844 chr9:104853204-104858563 250 nt 0.3520
hsa_ABCA1_0011100 Intron-Intron chr9:107617254-107617565 chr9:104854973-104855284 312 nt 0.4071
hsa_ABCA1_0011200 Intron-Exon-Intron chr9:107617422-107651476 chr9:104855141-104889195 1602 nt 0.4588
hsa_ABCA1_0011300 Intron-Exon-Intron chr9:107618740-107620979 chr9:104856459-104858698 2240 nt 0.4308
Showing 131 to 140 of 187 entries
Forensic Context

A study in mice demonstrated that the circABCA1 is significantly upregulated in spinal cord tissue after traumatic injury and functions as a core component of a regulatory axis, where it binds miR-135b-5p to influence KLF4 expression [Wang et al. DOI:10.4103/1673-5374.308100]. In a rat model of radiation-induced lung injury, single-cell transcriptomic analysis identified the orthologous gene associated with the circABCA1 as being involved in inflammatory processes [Shi et al. DOI:10.17305/bb.2024.10357].