Basic Information

Symbol
circABCA1
RNA Class
circRNA
Alias
ATP Binding Cassette Subfamily A Member 1 ABC1 TGD ATP-Binding Cassette, Sub-Family A (ABC1), Member 1 ATP-Binding Cassette Sub-Family A Member 1 Phospholipid-Transporting ATPase ABCA1 Cholesterol Efflux Regulatory Protein HDLDT1 ABC-1 CERP ATP-Binding Cassette Transporter A1 ATP-Binding Cassette Transporter 1 ATP-Binding Cassette 1 Tangier Disease Membrane-Bound EC 3.6.3.41 EC 7.6.2.1 EC 2.8.1.8 EC 2.7.7.8 HDLCQTL13 EC 3.6.3 HPALP1
Location (GRCh37)
9:107543284-107690527 UCSC Genome Browser
Location (GRCh38)
9:104781003-104928246
UCSC Genome Browser Search in Marker Scope
Host gene
ABCA1
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_chr9_0040600 Intergenic-Intergenic chr9:107619355-107619778 chr9:104857074-104857497 424 nt 0.5495
hsa_chr9_0040700 Intergenic-Intergenic chr9:107619488-107622118 chr9:104857207-104859837 2631 nt 0.4189
hsa_ABCA1_0011400 Intron-Intron chr9:107619744-107620034 chr9:104857463-104857753 291 nt 0.4261
hsa_ABCA1_0011900 Exon-Exon chr9:107620803-107645438 chr9:104858522-104883157 418 nt 0.4617
hsa_ABCA1_0012000 Exon-Exon chr9:107620803-107646849 chr9:104858522-104884568 560 nt 0.4696
hsa_ABCA1_0011800 Intron-Exon-Intron chr9:107620803-107668479 chr9:104858522-104906198 250 nt 0.3480
hsa_ABCA1_0012200 Exon-Exon chr9:107623960-107646849 chr9:104861679-104884568 148 nt 0.4932
hsa_ABCA1_0012100 Exon-Exon chr9:107623960-107666052 chr9:104861679-104903771 635 nt 0.5102
hsa_ABCA1_0012300 Intron-Intron chr9:107629692-107630054 chr9:104867411-104867773 363 nt 0.3609
hsa_ABCA1_0012400 Intron-Intron chr9:107634423-107634671 chr9:104872142-104872390 249 nt 0.3534
Showing 141 to 150 of 187 entries
Forensic Context

A study in mice demonstrated that the circABCA1 is significantly upregulated in spinal cord tissue after traumatic injury and functions as a core component of a regulatory axis, where it binds miR-135b-5p to influence KLF4 expression [Wang et al. DOI:10.4103/1673-5374.308100]. In a rat model of radiation-induced lung injury, single-cell transcriptomic analysis identified the orthologous gene associated with the circABCA1 as being involved in inflammatory processes [Shi et al. DOI:10.17305/bb.2024.10357].