Basic Information

Symbol
circABCA1
RNA Class
circRNA
Alias
ATP Binding Cassette Subfamily A Member 1 ABC1 TGD ATP-Binding Cassette, Sub-Family A (ABC1), Member 1 ATP-Binding Cassette Sub-Family A Member 1 Phospholipid-Transporting ATPase ABCA1 Cholesterol Efflux Regulatory Protein HDLDT1 ABC-1 CERP ATP-Binding Cassette Transporter A1 ATP-Binding Cassette Transporter 1 ATP-Binding Cassette 1 Tangier Disease Membrane-Bound EC 3.6.3.41 EC 7.6.2.1 EC 2.8.1.8 EC 2.7.7.8 HDLCQTL13 EC 3.6.3 HPALP1
Location (GRCh37)
9:107543284-107690527 UCSC Genome Browser
Location (GRCh38)
9:104781003-104928246
UCSC Genome Browser Search in Marker Scope
Host gene
ABCA1
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_ABCA1_0012500 Intron-Exon-Intron chr9:107638716-107651476 chr9:104876435-104889195 250 nt 0.4080
hsa_ABCA1_0012600 Intron-Exon-Intron chr9:107638716-107666052 chr9:104876435-104903771 250 nt 0.4720
hsa_chr9_0040800 Intergenic-Intergenic chr9:107644105-107644251 chr9:104881824-104881970 147 nt 0.5442
hsa_ABCA1_0013100 Exon-Exon chr9:107645320-107646849 chr9:104883039-104884568 261 nt 0.4828
hsa_ABCA1_0013300 Intron-Exon-Intron chr9:107645320-107656268 chr9:104883039-104893987 94 nt 0.5000
hsa_ABCA1_0012900 Intron-Exon-Intron chr9:107645320-107665405 chr9:104883039-104903124 250 nt 0.3640
hsa_ABCA1_0013200 Exon-Exon chr9:107645320-107666052 chr9:104883039-104903771 513 nt 0.5205
hsa_ABCA1_0013000 Intron-Exon-Intron chr9:107645320-107668288 chr9:104883039-104906007 2749 nt 0.4722
hsa_ABCA1_0013400 Intron-Exon-Intron chr9:107645320-107668479 chr9:104883039-104906198 119 nt 0.4706
hsa_chr9_0040900 Intergenic-Intergenic chr9:107655786-107656711 chr9:104893505-104894430 926 nt 0.4060
Showing 151 to 160 of 187 entries
Forensic Context

A study in mice demonstrated that the circABCA1 is significantly upregulated in spinal cord tissue after traumatic injury and functions as a core component of a regulatory axis, where it binds miR-135b-5p to influence KLF4 expression [Wang et al. DOI:10.4103/1673-5374.308100]. In a rat model of radiation-induced lung injury, single-cell transcriptomic analysis identified the orthologous gene associated with the circABCA1 as being involved in inflammatory processes [Shi et al. DOI:10.17305/bb.2024.10357].