Basic Information

Symbol
circABCA1
RNA Class
circRNA
Alias
ATP Binding Cassette Subfamily A Member 1 ABC1 TGD ATP-Binding Cassette, Sub-Family A (ABC1), Member 1 ATP-Binding Cassette Sub-Family A Member 1 Phospholipid-Transporting ATPase ABCA1 Cholesterol Efflux Regulatory Protein HDLDT1 ABC-1 CERP ATP-Binding Cassette Transporter A1 ATP-Binding Cassette Transporter 1 ATP-Binding Cassette 1 Tangier Disease Membrane-Bound EC 3.6.3.41 EC 7.6.2.1 EC 2.8.1.8 EC 2.7.7.8 HDLCQTL13 EC 3.6.3 HPALP1
Location (GRCh37)
9:107543284-107690527 UCSC Genome Browser
Location (GRCh38)
9:104781003-104928246
UCSC Genome Browser Search in Marker Scope
Host gene
ABCA1
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_chr9_0041000 Intergenic-Intergenic chr9:107656317-107656590 chr9:104894036-104894309 274 nt 0.4307
hsa_ABCA1_0013900 Intron-Intron chr9:107656971-107657452 chr9:104894690-104895171 482 nt 0.4129
hsa_ABCA1_0014000 Intron-Intron chr9:107661125-107662175 chr9:104898844-104899894 1051 nt 0.4348
hsa_ABCA1_0014100 Intron-Intron chr9:107662830-107663283 chr9:104900549-104901002 454 nt 0.4361
hsa_ABCA1_0014200 Intron-Intron chr9:107663665-107663882 chr9:104901384-104901601 218 nt 0.5000
hsa_ABCA1_0014400 Intron-Exon-Intron chr9:107664047-107666052 chr9:104901766-104903771 158 nt 0.5949
hsa_ABCA1_0014300 Intron-Exon-Intron chr9:107664047-107668479 chr9:104901766-104906198 250 nt 0.3360
hsa_ABCA1_0014500 Intron-Intron chr9:107664897-107665189 chr9:104902616-104902908 293 nt 0.3311
hsa_chr9_0041100 Intergenic-Intergenic chr9:107665144-107665574 chr9:104902863-104903293 431 nt 0.4478
hsa_ABCA1_0014600 Intron-Exon-Intron chr9:107665331-107668479 chr9:104903050-104906198 250 nt 0.3120
Showing 161 to 170 of 187 entries
Forensic Context

A study in mice demonstrated that the circABCA1 is significantly upregulated in spinal cord tissue after traumatic injury and functions as a core component of a regulatory axis, where it binds miR-135b-5p to influence KLF4 expression [Wang et al. DOI:10.4103/1673-5374.308100]. In a rat model of radiation-induced lung injury, single-cell transcriptomic analysis identified the orthologous gene associated with the circABCA1 as being involved in inflammatory processes [Shi et al. DOI:10.17305/bb.2024.10357].