Basic Information

Symbol
circABCA1
RNA Class
circRNA
Alias
ATP Binding Cassette Subfamily A Member 1 ABC1 TGD ATP-Binding Cassette, Sub-Family A (ABC1), Member 1 ATP-Binding Cassette Sub-Family A Member 1 Phospholipid-Transporting ATPase ABCA1 Cholesterol Efflux Regulatory Protein HDLDT1 ABC-1 CERP ATP-Binding Cassette Transporter A1 ATP-Binding Cassette Transporter 1 ATP-Binding Cassette 1 Tangier Disease Membrane-Bound EC 3.6.3.41 EC 7.6.2.1 EC 2.8.1.8 EC 2.7.7.8 HDLCQTL13 EC 3.6.3 HPALP1
Location (GRCh37)
9:107543284-107690527 UCSC Genome Browser
Location (GRCh38)
9:104781003-104928246
UCSC Genome Browser Search in Marker Scope
Host gene
ABCA1
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_ABCA1_0014700 Intron-Intron chr9:107666771-107673095 chr9:104904490-104910814 250 nt 0.3920
hsa_ABCA1_0014800 Intron-Intron chr9:107668263-107671588 chr9:104905982-104909307 250 nt 0.3120
hsa_ABCA1_0014900 Intron-Intron chr9:107668619-107674932 chr9:104906338-104912651 250 nt 0.3280
hsa_ABCA1_0015000 Intron-Intron chr9:107669220-107669402 chr9:104906939-104907121 183 nt 0.5137
hsa_chr9_0041200 Intergenic-Intergenic chr9:107670369-107670716 chr9:104908088-104908435 348 nt 0.3736
hsa_chr9_0041300 Intergenic-Intergenic chr9:107670526-107671472 chr9:104908245-104909191 947 nt 0.4192
hsa_ABCA1_0015100 Intron-Intron chr9:107670936-107685074 chr9:104908655-104922793 250 nt 0.3240
hsa_chr9_0041400 Intergenic-Intergenic chr9:107674525-107682117 chr9:104912244-104919836 51 nt 0.3922
hsa_chr9_0041500 Intergenic-Intergenic chr9:107674528-107674674 chr9:104912247-104912393 147 nt 0.5646
hsa_ABCA1_0015200 Intron-Intron chr9:107676003-107676841 chr9:104913722-104914560 839 nt 0.5018
Showing 171 to 180 of 187 entries
Forensic Context

A study in mice demonstrated that the circABCA1 is significantly upregulated in spinal cord tissue after traumatic injury and functions as a core component of a regulatory axis, where it binds miR-135b-5p to influence KLF4 expression [Wang et al. DOI:10.4103/1673-5374.308100]. In a rat model of radiation-induced lung injury, single-cell transcriptomic analysis identified the orthologous gene associated with the circABCA1 as being involved in inflammatory processes [Shi et al. DOI:10.17305/bb.2024.10357].