Basic Information
Symbol
circABCA1
RNA Class
circRNA
Alias
ATP Binding Cassette Subfamily A Member 1
ABC1
TGD
ATP-Binding Cassette, Sub-Family A (ABC1), Member 1
ATP-Binding Cassette Sub-Family A Member 1
Phospholipid-Transporting ATPase ABCA1
Cholesterol Efflux Regulatory Protein
HDLDT1
ABC-1
CERP
ATP-Binding Cassette Transporter A1
ATP-Binding Cassette Transporter 1
ATP-Binding Cassette 1
Tangier Disease
Membrane-Bound
EC 3.6.3.41
EC 7.6.2.1
EC 2.8.1.8
EC 2.7.7.8
HDLCQTL13
EC 3.6.3
HPALP1
Location (GRCh37)
9:107543284-107690527
UCSC Genome Browser
Location (GRCh38)
9:104781003-104928246
Host gene
ABCA1
Host category
mRNA
Forensic tag(s)
Other applications
External database
Transcripts
| ID | Type | Location (GRCh37) | Location (GRCh38) | Length | GC content |
|---|---|---|---|---|---|
| hsa_ABCA1_0015300 | Intron-Intron | chr9:107677661-107681909 | chr9:104915380-104919628 | 250 nt | 0.3480 |
| hsa_chr9_0041600 | Intergenic-Intergenic | chr9:107680542-107680971 | chr9:104918261-104918690 | 80 nt | 0.4125 |
| hsa_ABCA1_0015400 | Intron-Intron | chr9:107680774-107680976 | chr9:104918493-104918695 | 203 nt | 0.3300 |
| hsa_chr9_0041700 | Intergenic-Intergenic | chr9:107680860-107681254 | chr9:104918579-104918973 | 395 nt | 0.4203 |
| hsa_chr9_0041800 | Intergenic-Intergenic | chr9:107680943-107684505 | chr9:104918662-104922224 | 127 nt | 0.4646 |
| hsa_chr9_0041900 | Intergenic-Intergenic | chr9:107682067-107684505 | chr9:104919786-104922224 | 164 nt | 0.4146 |
| hsa_ABCA1_0015500 | Intron-Intron | chr9:107685229-107686697 | chr9:104922948-104924416 | 1469 nt | 0.3975 |
Showing 181 to 187 of 187 entries
Forensic Context
A study in mice demonstrated that the circABCA1 is significantly upregulated in spinal cord tissue after traumatic injury and functions as a core component of a regulatory axis, where it binds miR-135b-5p to influence KLF4 expression [Wang et al. DOI:10.4103/1673-5374.308100]. In a rat model of radiation-induced lung injury, single-cell transcriptomic analysis identified the orthologous gene associated with the circABCA1 as being involved in inflammatory processes [Shi et al. DOI:10.17305/bb.2024.10357].