Basic Information

Symbol
circABCA1
RNA Class
circRNA
Alias
ATP Binding Cassette Subfamily A Member 1 ABC1 TGD ATP-Binding Cassette, Sub-Family A (ABC1), Member 1 ATP-Binding Cassette Sub-Family A Member 1 Phospholipid-Transporting ATPase ABCA1 Cholesterol Efflux Regulatory Protein HDLDT1 ABC-1 CERP ATP-Binding Cassette Transporter A1 ATP-Binding Cassette Transporter 1 ATP-Binding Cassette 1 Tangier Disease Membrane-Bound EC 3.6.3.41 EC 7.6.2.1 EC 2.8.1.8 EC 2.7.7.8 HDLCQTL13 EC 3.6.3 HPALP1
Location (GRCh37)
9:107543284-107690527 UCSC Genome Browser
Location (GRCh38)
9:104781003-104928246
UCSC Genome Browser Search in Marker Scope
Host gene
ABCA1
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_ABCA1_0004900 Exon-Exon chr9:107568522-107624081 chr9:104806241-104861800 250 nt 0.4160
hsa_ABCA1_0006500 Exon-Exon chr9:107578424-107586859 chr9:104816143-104824578 1196 nt 0.5334
hsa_ABCA1_0007100 Exon-Exon chr9:107580944-107595052 chr9:104818663-104832771 2151 nt 0.5286
hsa_ABCA1_0007700 Exon-Exon chr9:107582208-107595052 chr9:104819927-104832771 1792 nt 0.5290
hsa_ABCA1_0008200 Exon-Exon chr9:107589229-107599377 chr9:104826948-104837096 1143 nt 0.5249
hsa_ABCA1_0011500 Exon-Exon chr9:107620803-107624081 chr9:104858522-104861800 299 nt 0.4582
hsa_ABCA1_0011600 Exon-Exon chr9:107620803-107651476 chr9:104858522-104889195 654 nt 0.4740
hsa_ABCA1_0011700 Exon-Exon chr9:107620803-107666052 chr9:104858522-104903771 812 nt 0.4975
hsa_ABCA1_0012700 Exon-Exon chr9:107645320-107645438 chr9:104883039-104883157 119 nt 0.4706
hsa_ABCA1_0012800 Exon-Exon chr9:107645320-107651476 chr9:104883039-104889195 355 nt 0.4873
Showing 11 to 20 of 187 entries
Forensic Context

A study in mice demonstrated that the circABCA1 is significantly upregulated in spinal cord tissue after traumatic injury and functions as a core component of a regulatory axis, where it binds miR-135b-5p to influence KLF4 expression [Wang et al. DOI:10.4103/1673-5374.308100]. In a rat model of radiation-induced lung injury, single-cell transcriptomic analysis identified the orthologous gene associated with the circABCA1 as being involved in inflammatory processes [Shi et al. DOI:10.17305/bb.2024.10357].