Basic Information

Symbol
circABCA1
RNA Class
circRNA
Alias
ATP Binding Cassette Subfamily A Member 1 ABC1 TGD ATP-Binding Cassette, Sub-Family A (ABC1), Member 1 ATP-Binding Cassette Sub-Family A Member 1 Phospholipid-Transporting ATPase ABCA1 Cholesterol Efflux Regulatory Protein HDLDT1 ABC-1 CERP ATP-Binding Cassette Transporter A1 ATP-Binding Cassette Transporter 1 ATP-Binding Cassette 1 Tangier Disease Membrane-Bound EC 3.6.3.41 EC 7.6.2.1 EC 2.8.1.8 EC 2.7.7.8 HDLCQTL13 EC 3.6.3 HPALP1
Location (GRCh37)
9:107543284-107690527 UCSC Genome Browser
Location (GRCh38)
9:104781003-104928246
UCSC Genome Browser Search in Marker Scope
Host gene
ABCA1
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_ABCA1_0013500 Exon-Exon chr9:107646708-107651476 chr9:104884427-104889195 236 nt 0.4958
hsa_ABCA1_0013600 Exon-Exon chr9:107651383-107651476 chr9:104889102-104889195 94 nt 0.5000
hsa_ABCA1_0013700 Exon-Exon chr9:107651383-107666052 chr9:104889102-104903771 252 nt 0.5595
hsa_ABCA1_0013800 Exon-Intergenic chr9:107651383-107690527 chr9:104889102-104928246 564 nt 0.5780
hsa_chr9_0038800 Intergenic-Intergenic chr9:107543917-107544259 chr9:104781636-104781978 343 nt 0.3032
hsa_chr9_0038900 Intergenic-Intergenic chr9:107545408-107545714 chr9:104783127-104783433 307 nt 0.3616
hsa_ABCA1_0000300 Exon-Exon chr9:107547677-107547920 chr9:104785396-104785639 244 nt 0.4467
hsa_ABCA1_0000400 Exon-Exon chr9:107547677-107560879 chr9:104785396-104798598 1702 nt 0.4777
hsa_ABCA1_0000500 Intron-Intron chr9:107547994-107548135 chr9:104785713-104785854 142 nt 0.4155
hsa_ABCA1_0000600 Exon-Exon chr9:107548579-107549241 chr9:104786298-104786960 93 nt 0.4409
Showing 21 to 30 of 187 entries
Forensic Context

A study in mice demonstrated that the circABCA1 is significantly upregulated in spinal cord tissue after traumatic injury and functions as a core component of a regulatory axis, where it binds miR-135b-5p to influence KLF4 expression [Wang et al. DOI:10.4103/1673-5374.308100]. In a rat model of radiation-induced lung injury, single-cell transcriptomic analysis identified the orthologous gene associated with the circABCA1 as being involved in inflammatory processes [Shi et al. DOI:10.17305/bb.2024.10357].