Basic Information

Symbol
circABCA1
RNA Class
circRNA
Alias
ATP Binding Cassette Subfamily A Member 1 ABC1 TGD ATP-Binding Cassette, Sub-Family A (ABC1), Member 1 ATP-Binding Cassette Sub-Family A Member 1 Phospholipid-Transporting ATPase ABCA1 Cholesterol Efflux Regulatory Protein HDLDT1 ABC-1 CERP ATP-Binding Cassette Transporter A1 ATP-Binding Cassette Transporter 1 ATP-Binding Cassette 1 Tangier Disease Membrane-Bound EC 3.6.3.41 EC 7.6.2.1 EC 2.8.1.8 EC 2.7.7.8 HDLCQTL13 EC 3.6.3 HPALP1
Location (GRCh37)
9:107543284-107690527 UCSC Genome Browser
Location (GRCh38)
9:104781003-104928246
UCSC Genome Browser Search in Marker Scope
Host gene
ABCA1
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_ABCA1_0000700 Exon-Intron chr9:107548612-107567105 chr9:104786331-104804824 2008 nt 0.4706
hsa_ABCA1_0000800 Exon-Exon chr9:107549154-107550335 chr9:104786873-104788054 239 nt 0.5188
hsa_chr9_0039000 Intergenic-Intergenic chr9:107549201-107550757 chr9:104786920-104788476 243 nt 0.5267
hsa_ABCA1_0001100 Exon-Exon chr9:107550201-107550848 chr9:104787920-104788567 277 nt 0.4910
hsa_ABCA1_0001200 Exon-Exon chr9:107550201-107553309 chr9:104787920-104791028 384 nt 0.4714
hsa_ABCA1_0001300 Exon-Exon chr9:107550201-107558478 chr9:104787920-104796197 145 nt 0.5310
hsa_ABCA1_0001400 Exon-Exon chr9:107550201-107579685 chr9:104787920-104817404 73 nt 0.5753
hsa_ABCA1_0000900 Exon-Exon chr9:107550201-107589450 chr9:104787920-104827169 250 nt 0.4040
hsa_ABCA1_0001000 Exon-Exon chr9:107550201-107599377 chr9:104787920-104837096 250 nt 0.4080
hsa_chr9_0039100 Intergenic-Intergenic chr9:107550247-107555531 chr9:104787966-104793250 602 nt 0.4651
Showing 31 to 40 of 187 entries
Forensic Context

A study in mice demonstrated that the circABCA1 is significantly upregulated in spinal cord tissue after traumatic injury and functions as a core component of a regulatory axis, where it binds miR-135b-5p to influence KLF4 expression [Wang et al. DOI:10.4103/1673-5374.308100]. In a rat model of radiation-induced lung injury, single-cell transcriptomic analysis identified the orthologous gene associated with the circABCA1 as being involved in inflammatory processes [Shi et al. DOI:10.17305/bb.2024.10357].