Basic Information

Symbol
circABCA1
RNA Class
circRNA
Alias
ATP Binding Cassette Subfamily A Member 1 ABC1 TGD ATP-Binding Cassette, Sub-Family A (ABC1), Member 1 ATP-Binding Cassette Sub-Family A Member 1 Phospholipid-Transporting ATPase ABCA1 Cholesterol Efflux Regulatory Protein HDLDT1 ABC-1 CERP ATP-Binding Cassette Transporter A1 ATP-Binding Cassette Transporter 1 ATP-Binding Cassette 1 Tangier Disease Membrane-Bound EC 3.6.3.41 EC 7.6.2.1 EC 2.8.1.8 EC 2.7.7.8 HDLCQTL13 EC 3.6.3 HPALP1
Location (GRCh37)
9:107543284-107690527 UCSC Genome Browser
Location (GRCh38)
9:104781003-104928246
UCSC Genome Browser Search in Marker Scope
Host gene
ABCA1
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_ABCA1_0001600 Exon-Exon chr9:107550707-107555187 chr9:104788426-104792906 63 nt 0.5079
hsa_ABCA1_0001700 Intron-Exon-Intron chr9:107552300-107553817 chr9:104790019-104791536 1518 nt 0.3452
hsa_ABCA1_0001900 Intron-Intron chr9:107553311-107554216 chr9:104791030-104791935 906 nt 0.4018
hsa_ABCA1_0002000 Exon-Exon chr9:107554217-107556791 chr9:104791936-104794510 63 nt 0.5079
hsa_ABCA1_0002100 Exon-Intron chr9:107554222-107555451 chr9:104791941-104793170 443 nt 0.4560
hsa_ABCA1_0002200 Exon-Exon chr9:107555067-107555581 chr9:104792786-104793300 251 nt 0.4741
hsa_ABCA1_0002300 Exon-Exon chr9:107555111-107558478 chr9:104792830-104796197 476 nt 0.4895
hsa_ABCA1_0002600 Intron-Intron chr9:107556333-107556577 chr9:104794052-104794296 245 nt 0.4735
hsa_ABCA1_0002700 Exon-Exon chr9:107556673-107568695 chr9:104794392-104806414 1211 nt 0.4872
hsa_ABCA1_0002900 Exon-Exon chr9:107558334-107562269 chr9:104796053-104799988 307 nt 0.5049
Showing 41 to 50 of 187 entries
Forensic Context

A study in mice demonstrated that the circABCA1 is significantly upregulated in spinal cord tissue after traumatic injury and functions as a core component of a regulatory axis, where it binds miR-135b-5p to influence KLF4 expression [Wang et al. DOI:10.4103/1673-5374.308100]. In a rat model of radiation-induced lung injury, single-cell transcriptomic analysis identified the orthologous gene associated with the circABCA1 as being involved in inflammatory processes [Shi et al. DOI:10.17305/bb.2024.10357].