Basic Information
Symbol
circABCA1
RNA Class
circRNA
Alias
ATP Binding Cassette Subfamily A Member 1
ABC1
TGD
ATP-Binding Cassette, Sub-Family A (ABC1), Member 1
ATP-Binding Cassette Sub-Family A Member 1
Phospholipid-Transporting ATPase ABCA1
Cholesterol Efflux Regulatory Protein
HDLDT1
ABC-1
CERP
ATP-Binding Cassette Transporter A1
ATP-Binding Cassette Transporter 1
ATP-Binding Cassette 1
Tangier Disease
Membrane-Bound
EC 3.6.3.41
EC 7.6.2.1
EC 2.8.1.8
EC 2.7.7.8
HDLCQTL13
EC 3.6.3
HPALP1
Location (GRCh37)
9:107543284-107690527
UCSC Genome Browser
Location (GRCh38)
9:104781003-104928246
Host gene
ABCA1
Host category
mRNA
Forensic tag(s)
Other applications
External database
Transcripts
| ID | Type | Location (GRCh37) | Location (GRCh38) | Length | GC content |
|---|---|---|---|---|---|
| hsa_ABCA1_0002800 | Exon-Exon | chr9:107558334-107568711 | chr9:104796053-104806430 | 1108 nt | 0.4928 |
| hsa_ABCA1_0003000 | Exon-Exon | chr9:107558590-107560879 | chr9:104796309-104798598 | 294 nt | 0.4864 |
| hsa_ABCA1_0003100 | Exon-Exon | chr9:107558590-107562865 | chr9:104796309-104800584 | 539 nt | 0.4768 |
| hsa_chr9_0039200 | Intergenic-Intergenic | chr9:107558610-107568675 | chr9:104796329-104806394 | 907 nt | 0.4818 |
| hsa_ABCA1_0003500 | Exon-Exon | chr9:107560702-107565597 | chr9:104798421-104803316 | 562 nt | 0.4644 |
| hsa_ABCA1_0003400 | Exon-Exon | chr9:107560702-107607850 | chr9:104798421-104845569 | 250 nt | 0.3960 |
| hsa_ABCA1_0003700 | Exon-Exon | chr9:107562791-107564384 | chr9:104800510-104802103 | 125 nt | 0.4000 |
| hsa_ABCA1_0003900 | Exon-Exon | chr9:107562791-107565597 | chr9:104800510-104803316 | 75 nt | 0.4133 |
| hsa_ABCA1_0004000 | Exon-Exon | chr9:107562791-107568711 | chr9:104800510-104806430 | 75 nt | 0.4133 |
| hsa_ABCA1_0003800 | Exon-Exon | chr9:107562791-107579685 | chr9:104800510-104817404 | 1311 nt | 0.5103 |
Showing 51 to 60 of 187 entries
Forensic Context
A study in mice demonstrated that the circABCA1 is significantly upregulated in spinal cord tissue after traumatic injury and functions as a core component of a regulatory axis, where it binds miR-135b-5p to influence KLF4 expression [Wang et al. DOI:10.4103/1673-5374.308100]. In a rat model of radiation-induced lung injury, single-cell transcriptomic analysis identified the orthologous gene associated with the circABCA1 as being involved in inflammatory processes [Shi et al. DOI:10.17305/bb.2024.10357].