Basic Information

Symbol
circABCA1
RNA Class
circRNA
Alias
ATP Binding Cassette Subfamily A Member 1 ABC1 TGD ATP-Binding Cassette, Sub-Family A (ABC1), Member 1 ATP-Binding Cassette Sub-Family A Member 1 Phospholipid-Transporting ATPase ABCA1 Cholesterol Efflux Regulatory Protein HDLDT1 ABC-1 CERP ATP-Binding Cassette Transporter A1 ATP-Binding Cassette Transporter 1 ATP-Binding Cassette 1 Tangier Disease Membrane-Bound EC 3.6.3.41 EC 7.6.2.1 EC 2.8.1.8 EC 2.7.7.8 HDLCQTL13 EC 3.6.3 HPALP1
Location (GRCh37)
9:107543284-107690527 UCSC Genome Browser
Location (GRCh38)
9:104781003-104928246
UCSC Genome Browser Search in Marker Scope
Host gene
ABCA1
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_ABCA1_0004400 Intron-Exon-Intron chr9:107564335-107567032 chr9:104802054-104804751 159 nt 0.4088
hsa_ABCA1_0004200 Exon-Exon chr9:107564335-107568711 chr9:104802054-104806430 424 nt 0.5000
hsa_ABCA1_0004300 Exon-Exon chr9:107564335-107576756 chr9:104802054-104814475 960 nt 0.5135
hsa_ABCA1_0004500 Exon-Exon chr9:107565565-107575003 chr9:104803284-104812722 159 nt 0.4088
hsa_ABCA1_0004600 Exon-Exon chr9:107566907-107568711 chr9:104804626-104806430 285 nt 0.5333
hsa_ABCA1_0004700 Exon-Exon chr9:107566907-107571845 chr9:104804626-104809564 285 nt 0.5333
hsa_ABCA1_0004800 Intron-Intron chr9:107567652-107568125 chr9:104805371-104805844 474 nt 0.4662
hsa_ABCA1_0005000 Exon-Exon chr9:107568522-107568711 chr9:104806241-104806430 190 nt 0.5947
hsa_ABCA1_0005100 Exon-Exon chr9:107568522-107571845 chr9:104806241-104809564 289 nt 0.5848
hsa_ABCA1_0005200 Exon-Exon chr9:107568522-107575003 chr9:104806241-104812722 190 nt 0.5947
Showing 61 to 70 of 187 entries
Forensic Context

A study in mice demonstrated that the circABCA1 is significantly upregulated in spinal cord tissue after traumatic injury and functions as a core component of a regulatory axis, where it binds miR-135b-5p to influence KLF4 expression [Wang et al. DOI:10.4103/1673-5374.308100]. In a rat model of radiation-induced lung injury, single-cell transcriptomic analysis identified the orthologous gene associated with the circABCA1 as being involved in inflammatory processes [Shi et al. DOI:10.17305/bb.2024.10357].