Basic Information

Symbol
circABCA1
RNA Class
circRNA
Alias
ATP Binding Cassette Subfamily A Member 1 ABC1 TGD ATP-Binding Cassette, Sub-Family A (ABC1), Member 1 ATP-Binding Cassette Sub-Family A Member 1 Phospholipid-Transporting ATPase ABCA1 Cholesterol Efflux Regulatory Protein HDLDT1 ABC-1 CERP ATP-Binding Cassette Transporter A1 ATP-Binding Cassette Transporter 1 ATP-Binding Cassette 1 Tangier Disease Membrane-Bound EC 3.6.3.41 EC 7.6.2.1 EC 2.8.1.8 EC 2.7.7.8 HDLCQTL13 EC 3.6.3 HPALP1
Location (GRCh37)
9:107543284-107690527 UCSC Genome Browser
Location (GRCh38)
9:104781003-104928246
UCSC Genome Browser Search in Marker Scope
Host gene
ABCA1
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_chr9_0039300 Intergenic-Intergenic chr9:107568645-107571826 chr9:104806364-104809545 147 nt 0.6054
hsa_ABCA1_0005500 Exon-Exon chr9:107571747-107575003 chr9:104809466-104812722 373 nt 0.5174
hsa_ABCA1_0005600 Intron-Exon-Intron chr9:107571747-107575019 chr9:104809466-104812738 389 nt 0.5167
hsa_ABCA1_0005700 Exon-Exon chr9:107571747-107576512 chr9:104809466-104814231 487 nt 0.5216
hsa_ABCA1_0005300 Exon-Exon chr9:107571747-107607850 chr9:104809466-104845569 250 nt 0.4320
hsa_ABCA1_0005400 Exon-Exon chr9:107571747-107624081 chr9:104809466-104861800 250 nt 0.4120
hsa_chr9_0039400 Intergenic-Intergenic chr9:107573216-107573429 chr9:104810935-104811148 214 nt 0.5701
hsa_ABCA1_0005800 Exon-Exon chr9:107574855-107575003 chr9:104812574-104812722 149 nt 0.4899
hsa_ABCA1_0005900 Exon-Exon chr9:107574855-107576512 chr9:104812574-104814231 263 nt 0.5095
hsa_ABCA1_0006000 Exon-Exon chr9:107574855-107576756 chr9:104812574-104814475 312 nt 0.5160
Showing 71 to 80 of 187 entries
Forensic Context

A study in mice demonstrated that the circABCA1 is significantly upregulated in spinal cord tissue after traumatic injury and functions as a core component of a regulatory axis, where it binds miR-135b-5p to influence KLF4 expression [Wang et al. DOI:10.4103/1673-5374.308100]. In a rat model of radiation-induced lung injury, single-cell transcriptomic analysis identified the orthologous gene associated with the circABCA1 as being involved in inflammatory processes [Shi et al. DOI:10.17305/bb.2024.10357].