Basic Information

Symbol
circABCA1
RNA Class
circRNA
Alias
ATP Binding Cassette Subfamily A Member 1 ABC1 TGD ATP-Binding Cassette, Sub-Family A (ABC1), Member 1 ATP-Binding Cassette Sub-Family A Member 1 Phospholipid-Transporting ATPase ABCA1 Cholesterol Efflux Regulatory Protein HDLDT1 ABC-1 CERP ATP-Binding Cassette Transporter A1 ATP-Binding Cassette Transporter 1 ATP-Binding Cassette 1 Tangier Disease Membrane-Bound EC 3.6.3.41 EC 7.6.2.1 EC 2.8.1.8 EC 2.7.7.8 HDLCQTL13 EC 3.6.3 HPALP1
Location (GRCh37)
9:107543284-107690527 UCSC Genome Browser
Location (GRCh38)
9:104781003-104928246
UCSC Genome Browser Search in Marker Scope
Host gene
ABCA1
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_ABCA1_0006100 Exon-Exon chr9:107574855-107589450 chr9:104812574-104827169 149 nt 0.4899
hsa_ABCA1_0006200 Exon-Exon chr9:107574951-107576484 chr9:104812670-104814203 139 nt 0.5396
hsa_ABCA1_0006300 Exon-Exon chr9:107576399-107576756 chr9:104814118-104814475 163 nt 0.5399
hsa_ABCA1_0006400 Exon-Exon chr9:107576399-107581164 chr9:104814118-104818883 120 nt 0.5500
hsa_ABCA1_0006700 Exon-Exon chr9:107578424-107581164 chr9:104816143-104818883 276 nt 0.5254
hsa_ABCA1_0006600 Exon-Exon chr9:107578424-107602800 chr9:104816143-104840519 2925 nt 0.5251
hsa_chr9_0039500 Intergenic-Intergenic chr9:107578512-107579637 chr9:104816231-104817356 140 nt 0.5357
hsa_chr9_0039600 Intergenic-Intergenic chr9:107578684-107578849 chr9:104816403-104816568 166 nt 0.5181
hsa_chr9_0039700 Intergenic-Intergenic chr9:107578753-107578891 chr9:104816472-104816610 139 nt 0.4820
hsa_ABCA1_0006900 Exon-Exon chr9:107579613-107581164 chr9:104817332-104818883 79 nt 0.5949
Showing 81 to 90 of 187 entries
Forensic Context

A study in mice demonstrated that the circABCA1 is significantly upregulated in spinal cord tissue after traumatic injury and functions as a core component of a regulatory axis, where it binds miR-135b-5p to influence KLF4 expression [Wang et al. DOI:10.4103/1673-5374.308100]. In a rat model of radiation-induced lung injury, single-cell transcriptomic analysis identified the orthologous gene associated with the circABCA1 as being involved in inflammatory processes [Shi et al. DOI:10.17305/bb.2024.10357].