Basic Information

Symbol
circOGDH
RNA Class
circRNA
Alias
Oxoglutarate Dehydrogenase OGDC-E1 OGDH2 KGD1 E1k Thiamine Diphosphate (ThDP)-Dependent 2-Oxoglutarate Dehydrogenase Oxoglutarate (Alpha-Ketoglutarate) Dehydrogenase (Lipoamide) 2-Oxoglutarate Dehydrogenase Complex Component E1 2-Oxoglutarate Dehydrogenase, Mitochondrial Alpha-KGDH-E1 EC 1.2.4.2 OGDH-E1 HsOGDH E1o Oxoglutarate Dehydrogenase (Succinyl-Transferring) Alpha-Ketoglutarate Dehydrogenase Testicular Tissue Protein Li 131 Oxoglutarate Decarboxylase AKGDH OGDHD OGDC
Location (GRCh37)
7:44654708-44748474 UCSC Genome Browser
Location (GRCh38)
7:44615109-44708875
UCSC Genome Browser Search in Marker Scope
Host gene
OGDH
Host category
mRNA
Forensic tag(s)
Postmortem interval inference
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_OGDH_0008400 Exon-Exon chr7:44736513-44747335 chr7:44696914-44707736 1048 nt 0.5725
hsa_chr7_0419700 Intergenic-Intergenic chr7:44737014-44737856 chr7:44697415-44698257 83 nt 0.5783
hsa_OGDH_0008500 Exon-Exon chr7:44737203-44747335 chr7:44697604-44707736 768 nt 0.5651
hsa_OGDH_0008600 Intron-Exon-Intron chr7:44737664-44738068 chr7:44698065-44698469 405 nt 0.5481
hsa_OGDH_0009000 Intron-Exon-Intron chr7:44739740-44742128 chr7:44700141-44702529 312 nt 0.5321
hsa_OGDH_0008900 Exon-Exon chr7:44739740-44746987 chr7:44700141-44707388 366 nt 0.5355
hsa_chr7_0419800 Intergenic-Intergenic chr7:44739782-44746924 chr7:44700183-44707325 261 nt 0.5326
hsa_OGDH_0009100 Intron-Exon-Intron chr7:44741142-44742128 chr7:44701543-44702529 73 nt 0.5205
hsa_OGDH_0009200 Exon-Exon chr7:44741142-44746987 chr7:44701543-44707388 164 nt 0.5610
hsa_OGDH_0009300 Intron-Intron chr7:44741429-44746129 chr7:44701830-44706530 250 nt 0.4080
Showing 101 to 110 of 120 entries
Forensic Context

A study in mice demonstrated that the linear and circular RNA form of the circOGDH (LC-Ogdh) was evaluated as a reference gene for postmortem interval (PMI) estimation in liver tissue, where it was identified as the most stable candidate using geNorm and NormFinder algorithms [Tu et al. DOI:10.1007/s12024-018-9973-y]. The research, which examined RNA degradation in heart, liver, and skeletal muscle over eight days postmortem, found that LC-Ogdh showed prioritized stability in liver, ranking first among the tested genes, and was part of a tissue-specific panel of stable reference genes for normalization in RT-qPCR-based PMI estimation.