Basic Information

Symbol
circOGDH
RNA Class
circRNA
Alias
Oxoglutarate Dehydrogenase OGDC-E1 OGDH2 KGD1 E1k Thiamine Diphosphate (ThDP)-Dependent 2-Oxoglutarate Dehydrogenase Oxoglutarate (Alpha-Ketoglutarate) Dehydrogenase (Lipoamide) 2-Oxoglutarate Dehydrogenase Complex Component E1 2-Oxoglutarate Dehydrogenase, Mitochondrial Alpha-KGDH-E1 EC 1.2.4.2 OGDH-E1 HsOGDH E1o Oxoglutarate Dehydrogenase (Succinyl-Transferring) Alpha-Ketoglutarate Dehydrogenase Testicular Tissue Protein Li 131 Oxoglutarate Decarboxylase AKGDH OGDHD OGDC
Location (GRCh37)
7:44654708-44748474 UCSC Genome Browser
Location (GRCh38)
7:44615109-44708875
UCSC Genome Browser Search in Marker Scope
Host gene
OGDH
Host category
mRNA
Forensic tag(s)
Postmortem interval inference
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_OGDH_0009500 Intron-Intron chr7:44741578-44742286 chr7:44701979-44702687 709 nt 0.4979
hsa_OGDH_0009400 Intron-Intron chr7:44741578-44744404 chr7:44701979-44704805 2827 nt 0.4503
hsa_chr7_0419900 Intergenic-Intergenic chr7:44743758-44744341 chr7:44704159-44704742 584 nt 0.3493
hsa_OGDH_0009600 Exon-Exon chr7:44746964-44747610 chr7:44707365-44708011 312 nt 0.6058
hsa_chr7_0420000 Intergenic-Intergenic chr7:44747202-44747700 chr7:44707603-44708101 356 nt 0.6096
hsa_chr7_0420100 Intergenic-Intergenic chr7:44747202-44748440 chr7:44707603-44708841 1096 nt 0.6095
hsa_chr7_0420200 Intergenic-Intergenic chr7:44747229-44747532 chr7:44707630-44707933 162 nt 0.6296
hsa_chr7_0420300 Intergenic-Intergenic chr7:44747494-44748154 chr7:44707895-44708555 660 nt 0.6152
hsa_chr7_0420400 Intergenic-Intergenic chr7:44747697-44748373 chr7:44708098-44708774 677 nt 0.6219
hsa_OGDH_0009700 Exon-Exon chr7:44748136-44748474 chr7:44708537-44708875 339 nt 0.5870
Showing 111 to 120 of 120 entries
Forensic Context

A study in mice demonstrated that the linear and circular RNA form of the circOGDH (LC-Ogdh) was evaluated as a reference gene for postmortem interval (PMI) estimation in liver tissue, where it was identified as the most stable candidate using geNorm and NormFinder algorithms [Tu et al. DOI:10.1007/s12024-018-9973-y]. The research, which examined RNA degradation in heart, liver, and skeletal muscle over eight days postmortem, found that LC-Ogdh showed prioritized stability in liver, ranking first among the tested genes, and was part of a tissue-specific panel of stable reference genes for normalization in RT-qPCR-based PMI estimation.