Basic Information

Symbol
circOGDH
RNA Class
circRNA
Alias
Oxoglutarate Dehydrogenase OGDC-E1 OGDH2 KGD1 E1k Thiamine Diphosphate (ThDP)-Dependent 2-Oxoglutarate Dehydrogenase Oxoglutarate (Alpha-Ketoglutarate) Dehydrogenase (Lipoamide) 2-Oxoglutarate Dehydrogenase Complex Component E1 2-Oxoglutarate Dehydrogenase, Mitochondrial Alpha-KGDH-E1 EC 1.2.4.2 OGDH-E1 HsOGDH E1o Oxoglutarate Dehydrogenase (Succinyl-Transferring) Alpha-Ketoglutarate Dehydrogenase Testicular Tissue Protein Li 131 Oxoglutarate Decarboxylase AKGDH OGDHD OGDC
Location (GRCh37)
7:44654708-44748474 UCSC Genome Browser
Location (GRCh38)
7:44615109-44708875
UCSC Genome Browser Search in Marker Scope
Host gene
OGDH
Host category
mRNA
Forensic tag(s)
Postmortem interval inference
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_OGDH_0001000 Intron-Exon-Intron chr7:44663916-44664866 chr7:44624317-44625267 951 nt 0.4732
hsa_OGDH_0001100 Intron-Exon-Intron chr7:44663916-44665001 chr7:44624317-44625402 1086 nt 0.4770
hsa_OGDH_0001200 Intron-Exon-Intron chr7:44663916-44665167 chr7:44624317-44625568 1252 nt 0.4673
hsa_OGDH_0001500 Exon-Exon chr7:44663916-44687129 chr7:44624317-44647530 87 nt 0.4023
hsa_OGDH_0000800 Intron-Exon-Intron chr7:44663916-44694370 chr7:44624317-44654771 250 nt 0.3560
hsa_OGDH_0001300 Exon-Exon chr7:44663916-44695961 chr7:44624317-44656362 577 nt 0.4957
hsa_OGDH_0001600 Exon-Exon chr7:44663916-44706450 chr7:44624317-44666851 365 nt 0.4904
hsa_OGDH_0001700 Intron-Exon-Intron chr7:44663916-44706856 chr7:44624317-44667257 1099 nt 0.4777
hsa_OGDH_0001400 Exon-Exon chr7:44663916-44715748 chr7:44624317-44676149 1266 nt 0.5237
hsa_OGDH_0002000 Exon-Intron chr7:44663920-44664866 chr7:44624321-44625267 947 nt 0.4720
Showing 41 to 50 of 120 entries
Forensic Context

A study in mice demonstrated that the linear and circular RNA form of the circOGDH (LC-Ogdh) was evaluated as a reference gene for postmortem interval (PMI) estimation in liver tissue, where it was identified as the most stable candidate using geNorm and NormFinder algorithms [Tu et al. DOI:10.1007/s12024-018-9973-y]. The research, which examined RNA degradation in heart, liver, and skeletal muscle over eight days postmortem, found that LC-Ogdh showed prioritized stability in liver, ranking first among the tested genes, and was part of a tissue-specific panel of stable reference genes for normalization in RT-qPCR-based PMI estimation.