Basic Information

Symbol
circPABPN1
RNA Class
circRNA
Alias
Poly(A) Binding Protein Nuclear 1 PAB2 PABP2 Polyadenylate-Binding Protein 2 PABP-2 PABII OPMD Polyadenylate-Binding Nuclear Protein 1 Poly(A)-Binding Protein, Nuclear 1 Poly(A) Binding Protein, Nuclear 1 Nuclear Poly(A)-Binding Protein 1 Poly(A) Binding Protein II Poly(A)-Binding Protein II Poly(A) Binding Protein 2 Poly(A)-Binding Protein 2
Location (GRCh37)
14:23790809-23795070 UCSC Genome Browser
Location (GRCh38)
14:23321600-23325861
UCSC Genome Browser Search in Marker Scope
Host gene
PABPN1
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_BCL2L2-PABPN1_0000700 Exon-Exon chr14:23791390-23792692 chr14:23322181-23323483 290 nt 0.5000
hsa_BCL2L2-PABPN1_0001000 Exon-Exon chr14:23792586-23792692 chr14:23323377-23323483 107 nt 0.4860
hsa_BCL2L2-PABPN1_0001300 Exon-Exon chr14:23793347-23793498 chr14:23324138-23324289 152 nt 0.5921
hsa_PABPN1_0000100 Exon-Exon chr14:23790809-23794479 chr14:23321600-23325270 775 nt 0.5871
hsa_PABPN1_0000200 Exon-Exon chr14:23790838-23791029 chr14:23321629-23321820 192 nt 0.7656
hsa_PABPN1_0000300 Exon-Exon chr14:23790970-23791464 chr14:23321761-23322255 75 nt 0.5067
hsa_PABPN1_0000400 Exon-Exon chr14:23790973-23791464 chr14:23321764-23322255 132 nt 0.6061
hsa_PABPN1_0000500 Exon-Exon chr14:23790979-23794842 chr14:23321770-23325633 51 nt 0.7451
hsa_PABPN1_0000600 Exon-Exon chr14:23791433-23793643 chr14:23322224-23324434 632 nt 0.5380
hsa_PABPN1_0000700 Intron-Exon chr14:23792408-23793633 chr14:23323199-23324424 660 nt 0.5197
Showing 1 to 10 of 21 entries
Forensic Context

A study in human cell lines demonstrated that the circPABPN1 binds HuR (ELAVL1) and inhibits translation of linear PABPN1 mRNA [Patop et al. DOI:10.15252/embj.2018100836].