Basic Information

Symbol
circPABPN1
RNA Class
circRNA
Alias
Poly(A) Binding Protein Nuclear 1 PAB2 PABP2 Polyadenylate-Binding Protein 2 PABP-2 PABII OPMD Polyadenylate-Binding Nuclear Protein 1 Poly(A)-Binding Protein, Nuclear 1 Poly(A) Binding Protein, Nuclear 1 Nuclear Poly(A)-Binding Protein 1 Poly(A) Binding Protein II Poly(A)-Binding Protein II Poly(A) Binding Protein 2 Poly(A)-Binding Protein 2
Location (GRCh37)
14:23790809-23795070 UCSC Genome Browser
Location (GRCh38)
14:23321600-23325861
UCSC Genome Browser Search in Marker Scope
Host gene
PABPN1
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_chr14_0105300 Intergenic-Intergenic chr14:23793427-23793580 chr14:23324218-23324371 154 nt 0.5974
hsa_PABPN1_0000900 Exon-Exon chr14:23794669-23794842 chr14:23325460-23325633 174 nt 0.6379
hsa_chr14_0105400 Intergenic-Intergenic chr14:23794673-23794880 chr14:23325464-23325671 208 nt 0.5962
hsa_chr14_0105500 Intergenic-Intergenic chr14:23794673-23794938 chr14:23325464-23325729 266 nt 0.5902
hsa_PABPN1_0001000 Exon-Exon chr14:23794713-23794956 chr14:23325504-23325747 244 nt 0.5820
hsa_PABPN1_0001100 Exon-Exon chr14:23794713-23795070 chr14:23325504-23325861 358 nt 0.5531
hsa_chr14_0105600 Intergenic-Intergenic chr14:23794877-23795028 chr14:23325668-23325819 152 nt 0.5789
hsa_BCL2L2-PABPN1_0000800 Exon-Exon chr14:23791390-23793261 chr14:23322181-23324052 378 nt 0.4841
hsa_BCL2L2-PABPN1_0000900 Exon-Exon chr14:23791390-23793498 chr14:23322181-23324289 267 nt 0.5506
hsa_BCL2L2-PABPN1_0001100 Exon-Exon chr14:23792586-23793498 chr14:23323377-23324289 347 nt 0.5187
Showing 11 to 20 of 21 entries
Forensic Context

A study in human cell lines demonstrated that the circPABPN1 binds HuR (ELAVL1) and inhibits translation of linear PABPN1 mRNA [Patop et al. DOI:10.15252/embj.2018100836].