Basic Information

Symbol
circPAIP2
RNA Class
circRNA
Alias
Poly(A) Binding Protein Interacting Protein 2 PAIP2A PABP-Interacting Protein 2 Polyadenylate-Binding Protein-Interacting Protein 2 PAIP-2 Poly(A)-Binding Protein-Interacting Protein 2 PolyA-Binding Protein-Interacting Protein 2 PABC1-Interacting Protein 2
Location (GRCh37)
5:138660790-138705337 UCSC Genome Browser
Location (GRCh38)
5:139325101-139369648
UCSC Genome Browser Search in Marker Scope
Host gene
PAIP2
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_PAIP2_0002100 Exon-Exon chr5:138699448-138700432 chr5:139363759-139364743 344 nt 0.4012
hsa_PAIP2_0003400 Exon-Exon chr5:138704452-138704559 chr5:139368763-139368870 108 nt 0.4352
hsa_PAIP2_0000300 Exon-Exon chr5:138677563-138700432 chr5:139341874-139364743 237 nt 0.5485
hsa_PAIP2_0000400 Exon-Exon chr5:138679019-138700432 chr5:139343330-139364743 253 nt 0.4269
hsa_PAIP2_0000500 Exon-Exon chr5:138679019-138704471 chr5:139343330-139368782 127 nt 0.4488
hsa_PAIP2_0000600 Intron-Intron chr5:138679822-138679987 chr5:139344133-139344298 166 nt 0.3976
hsa_PAIP2_0000700 Intron-Exon chr5:138681100-138700432 chr5:139345411-139364743 459 nt 0.3813
hsa_PAIP2_0000800 Intron-Exon chr5:138681100-138704471 chr5:139345411-139368782 50 nt 0.4400
hsa_PAIP2_0000900 Intron-Intron chr5:138681751-138682142 chr5:139346062-139346453 392 nt 0.4464
hsa_chr5_0159600 Intergenic-Intergenic chr5:138682581-138682994 chr5:139346892-139347305 414 nt 0.4203
Showing 1 to 10 of 33 entries
Forensic Context

A review consolidating research across multiple species including human, mouse, and rat indicates that the circPAIP2, a nuclear exon-intron circRNA, enhances transcription of its parental PAIP2 gene in a positive feedback loop by interacting with U1 snRNP complexes and RNA polymerase II [Chan et al. DOI:10.016/j.tibs.2018.09.016].